Gene detail information of Glyur000011s00000639.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G25880.10NADP-malic enzyme 3
NRXP_003522719.10PREDICTED: NADP-dependent malic enzyme-like isoform X1 [Glycine max]
COGYP_007511972.10malate dehydrogenase [Bradyrhizobium oligotrophicum S58]
Swissprottr|P12628|MAOX_PHAVU0NADP-dependent malic enzyme
trEMBLtr|I1JUX8|I1JUX8_SOYBN0Malic enzyme {ECO:0000256|RuleBase:RU003426}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000116101565984+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00029E1.1.1.40, maeB EC:1.1.1.40 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000639.3PF00390.14malic1172935.40E-75
Glyur000011s00000639.3PF03949.10Malic_M3045572.10E-90


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.469
SRR1783600control3.556
SRR1783602moderate drought stress2.847
SRR1811619moderate drought stress2.783

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.109
DRR006520Root Summer glycyrrhizin high producing strain2.958
DRR006521Root Winter glycyrrhizin high producing strain0.095
DRR006522Root Winter glycyrrhizin high producing strain0.093
DRR006523Root Summer glycyrrhizin low producing strain5.511
DRR006524Root Summer glycyrrhizin low producing strain5.671
DRR006525Leaf Summer glycyrrhizin high producing strain6.843
DRR006526Leaf Summer glycyrrhizin high producing strain6.871

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)62.679
SRR2868004Drought Stress(Tissue:root)38.350
SRR2967015Control (Tissue:root)20.585

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.284
SRR9715740Leave17.631
SRR9715741Leave24.454
SRR9715739Root4.961
SRR9715742Root5.570
SRR9715743Root5.335

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h141.299
SRR8749028MeJA induced 9h111.348
SRR8749029MeJA induced 9h74.996
SRR8749030Uninduced44.552
SRR8749031Uninduced60.019
SRR8749032Uninduced29.908

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.917
SRR8400027Control-Root10.294

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved