Gene detail information of Glyur000011s00000645.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G25930.10Protein kinase family protein with leucine-rich repeat domain
NRXP_004501091.10PREDICTED: receptor-like protein kinase HSL1-like isoform X1 [Cicer arietinum]
COGYP_004775215.16.00E-50RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH0Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|G7J3I8|G7J3I8_MEDTR0Leucine-rich receptor-like kinase family protein {ECO:0000313|EMBL:AES73895.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011111638115283+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000645.1PF08263.7LRRNT_235707.10E-08
Glyur000011s00000645.1PF13855.1LRR_8991571.50E-07
Glyur000011s00000645.1PF13855.1LRR_82212801.30E-07
Glyur000011s00000645.1PF13516.1LRR_63143360.67
Glyur000011s00000645.1PF13855.1LRR_85055651.60E-07
Glyur000011s00000645.1PF00560.28LRR_15805990.66
Glyur000011s00000645.1PF00069.20Pkinase7039775.60E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.724
SRR1783600control6.792
SRR1783602moderate drought stress10.248
SRR1811619moderate drought stress10.134

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.153
DRR006520Root Summer glycyrrhizin high producing strain2.158
DRR006521Root Winter glycyrrhizin high producing strain18.634
DRR006522Root Winter glycyrrhizin high producing strain17.971
DRR006523Root Summer glycyrrhizin low producing strain1.927
DRR006524Root Summer glycyrrhizin low producing strain1.806
DRR006525Leaf Summer glycyrrhizin high producing strain1.516
DRR006526Leaf Summer glycyrrhizin high producing strain1.509

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.719
SRR2868004Drought Stress(Tissue:root)19.534
SRR2967015Control (Tissue:root)13.820

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.756
SRR9715740Leave5.393
SRR9715741Leave10.184
SRR9715739Root10.150
SRR9715742Root18.993
SRR9715743Root17.832

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.838
SRR8749028MeJA induced 9h60.428
SRR8749029MeJA induced 9h21.657
SRR8749030Uninduced28.370
SRR8749031Uninduced16.596
SRR8749032Uninduced21.883

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.477
SRR8400027Control-Root6.573

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved