Gene detail information of Glyur000011s00000650.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26270.10phosphofructokinase 3
NRXP_003522720.10PREDICTED: 6-phosphofructokinase 3-like [Glycine max]
COGYP_003804939.12.00E-123phosphofructokinase [Spirochaeta smaragdinae DSM 11293]
Swissprottr|Q94AA4|PFKA3_ARATH0ATP-dependent 6-phosphofructokinase 3 {ECO:0000255|HAMAP-Rule:MF_03186}
trEMBLtr|I1JUY7|I1JUY7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09180.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011131028137921+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000650.2PF00365.15PFK963343.50E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control38.879
SRR1783600control39.079
SRR1783602moderate drought stress28.342
SRR1811619moderate drought stress28.467

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain40.062
DRR006520Root Summer glycyrrhizin high producing strain39.920
DRR006521Root Winter glycyrrhizin high producing strain411.326
DRR006522Root Winter glycyrrhizin high producing strain398.894
DRR006523Root Summer glycyrrhizin low producing strain40.752
DRR006524Root Summer glycyrrhizin low producing strain40.966
DRR006525Leaf Summer glycyrrhizin high producing strain8.590
DRR006526Leaf Summer glycyrrhizin high producing strain8.665

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.456
SRR2868004Drought Stress(Tissue:root)26.785
SRR2967015Control (Tissue:root)26.942

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.973
SRR9715740Leave5.641
SRR9715741Leave6.677
SRR9715739Root14.851
SRR9715742Root39.213
SRR9715743Root33.175

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h140.480
SRR8749028MeJA induced 9h496.726
SRR8749029MeJA induced 9h615.621
SRR8749030Uninduced120.165
SRR8749031Uninduced441.943
SRR8749032Uninduced529.280

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.120
SRR8400027Control-Root42.412

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved