Gene detail information of Glyur000011s00000673.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G49650.10xylulose kinase-2
NRXP_003603669.10Xylulose kinase [Medicago truncatula]
COGYP_003548613.18.00E-91FGGY-like carbohydrate kinase [Coraliomargarita akajimensis DSM 45221]
trEMBLtr|G7J420|G7J420_MEDTR0Xylulose kinase-like protein {ECO:0000313|EMBL:AES73920.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011281342285530+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00854xylB, XYLB EC:2.7.1.17 Pentose and glucuronate interconversions map00040


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000673.1PF00370.16FGGY_N111122.20E-06
Glyur000011s00000673.1PF00370.16FGGY_N1342873.20E-15
Glyur000011s00000673.1PF02782.11FGGY_C3004692.70E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.984
SRR1783600control12.026
SRR1783602moderate drought stress11.745
SRR1811619moderate drought stress11.805

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.899
DRR006520Root Summer glycyrrhizin high producing strain13.972
DRR006521Root Winter glycyrrhizin high producing strain11.480
DRR006522Root Winter glycyrrhizin high producing strain11.689
DRR006523Root Summer glycyrrhizin low producing strain13.900
DRR006524Root Summer glycyrrhizin low producing strain13.526
DRR006525Leaf Summer glycyrrhizin high producing strain20.544
DRR006526Leaf Summer glycyrrhizin high producing strain20.816

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.264
SRR2868004Drought Stress(Tissue:root)23.596
SRR2967015Control (Tissue:root)27.239

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.023
SRR9715740Leave18.907
SRR9715741Leave17.994
SRR9715739Root8.192
SRR9715742Root11.579
SRR9715743Root11.174

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.730
SRR8749028MeJA induced 9h23.845
SRR8749029MeJA induced 9h17.616
SRR8749030Uninduced34.799
SRR8749031Uninduced38.425
SRR8749032Uninduced30.599

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.880
SRR8400027Control-Root17.899

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved