Gene detail information of Glyur000011s00000681.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09970.10Leucine-rich receptor-like protein kinase family protein
NRXP_003526519.10PREDICTED: receptor-like protein kinase HAIKU2-like [Glycine max]
COGYP_004775215.17.00E-51RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LJM4|IKU2_ARATH0Receptor-like protein kinase HAIKU2 (Precursor)
trEMBLtr|I1K9J9|I1K9J9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G09520.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011330732334279-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000681.1PF08263.7LRRNT_229672.10E-05
Glyur000011s00000681.1PF13855.1LRR_85045628.00E-07
Glyur000011s00000681.1PF00069.20Pkinase6748259.90E-18
Glyur000011s00000681.1PF07714.12Pkinase_Tyr8329242.10E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.752
SRR1783600control45.071
SRR1783602moderate drought stress84.657
SRR1811619moderate drought stress84.331

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.875
DRR006520Root Summer glycyrrhizin high producing strain61.041
DRR006521Root Winter glycyrrhizin high producing strain32.899
DRR006522Root Winter glycyrrhizin high producing strain32.369
DRR006523Root Summer glycyrrhizin low producing strain117.006
DRR006524Root Summer glycyrrhizin low producing strain116.794
DRR006525Leaf Summer glycyrrhizin high producing strain21.472
DRR006526Leaf Summer glycyrrhizin high producing strain21.512

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)86.854
SRR2868004Drought Stress(Tissue:root)161.685
SRR2967015Control (Tissue:root)154.766

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.652
SRR9715740Leave50.026
SRR9715741Leave109.360
SRR9715739Root73.920
SRR9715742Root157.270
SRR9715743Root140.569

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h54.832
SRR8749028MeJA induced 9h90.111
SRR8749029MeJA induced 9h96.997
SRR8749030Uninduced103.604
SRR8749031Uninduced32.988
SRR8749032Uninduced69.319

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root89.423
SRR8400027Control-Root76.062

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved