Gene detail information of Glyur000011s00000688.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27600.27.00E-106Nucleotide-diphospho-sugar transferases superfamily protein
NRXP_004501068.10PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Cicer arietinum]
Swissprottr|Q9SXC4|IRX9H_ARATH5.00E-144Probable beta-1,4-xylosyltransferase IRX9H
trEMBLtr|Q50HW4|Q50HW4_MEDTR0Beta-1,4-xylosyltransferase, putative {ECO:0000313|EMBL:AES73931.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011374286377879+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0015018  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000688.1PF03360.11Glyco_transf_431843591.70E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.328
SRR1783600control10.934
SRR1783602moderate drought stress9.186
SRR1811619moderate drought stress9.266

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.377
DRR006520Root Summer glycyrrhizin high producing strain20.683
DRR006521Root Winter glycyrrhizin high producing strain9.416
DRR006522Root Winter glycyrrhizin high producing strain8.821
DRR006523Root Summer glycyrrhizin low producing strain22.889
DRR006524Root Summer glycyrrhizin low producing strain21.934
DRR006525Leaf Summer glycyrrhizin high producing strain10.101
DRR006526Leaf Summer glycyrrhizin high producing strain10.126

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.561
SRR2868004Drought Stress(Tissue:root)29.427
SRR2967015Control (Tissue:root)29.579

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.404
SRR9715740Leave14.991
SRR9715741Leave15.329
SRR9715739Root23.442
SRR9715742Root20.045
SRR9715743Root24.225

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.599
SRR8749028MeJA induced 9h19.458
SRR8749029MeJA induced 9h24.640
SRR8749030Uninduced16.757
SRR8749031Uninduced16.161
SRR8749032Uninduced12.774

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.271
SRR8400027Control-Root28.887

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved