Gene detail information of Glyur000011s00000692.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37870.10phosphoenolpyruvate carboxykinase 1
NRXP_003522736.10PREDICTED: phosphoenolpyruvate carboxykinase [ATP]-like [Glycine max]
COGYP_003290475.10phosphoenolpyruvate carboxykinase [Rhodothermus marinus DSM 4252]
Swissprottr|Q9T074|PCKA_ARATH0Phosphoenolpyruvate carboxykinase [ATP]
trEMBLtr|I1JV14|I1JV14_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09510.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011405732412063-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01610E4.1.1.49, pckA EC:4.1.1.49 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006094  gluconeogenesis


molecular_function

GO:0004611  phosphoenolpyruvate carboxykinase activity

GO:0004612  phosphoenolpyruvate carboxykinase (ATP) activity

GO:0005524  ATP binding

GO:0017076  purine nucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000692.1PF01293.15PEPCK_ATP1806494.20E-212


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.718
SRR1783600control43.616
SRR1783602moderate drought stress56.500
SRR1811619moderate drought stress55.727

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain97.233
DRR006520Root Summer glycyrrhizin high producing strain96.181
DRR006521Root Winter glycyrrhizin high producing strain147.501
DRR006522Root Winter glycyrrhizin high producing strain143.524
DRR006523Root Summer glycyrrhizin low producing strain155.454
DRR006524Root Summer glycyrrhizin low producing strain155.845
DRR006525Leaf Summer glycyrrhizin high producing strain7.101
DRR006526Leaf Summer glycyrrhizin high producing strain7.225

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.391
SRR2868004Drought Stress(Tissue:root)53.556
SRR2967015Control (Tissue:root)90.090

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.384
SRR9715740Leave7.190
SRR9715741Leave12.128
SRR9715739Root28.058
SRR9715742Root58.179
SRR9715743Root57.635

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h83.611
SRR8749028MeJA induced 9h110.897
SRR8749029MeJA induced 9h91.371
SRR8749030Uninduced26.678
SRR8749031Uninduced18.704
SRR8749032Uninduced21.301

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.935
SRR8400027Control-Root66.479

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved