Gene detail information of Glyur000011s00000694.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G58290.10Glutamyl-tRNA reductase family protein
NRXP_003603691.10Glutamyl-tRNA reductase [Medicago truncatula]
COGYP_007108864.18.00E-132glutamyl-tRNA reductase [Geitlerinema sp. PCC 7407]
Swissprottr|P93111|HEM11_CUCSA0Glutamyl-tRNA reductase 1, chloroplastic (Precursor)
trEMBLtr|G7J442|G7J442_MEDTR0Glutamyl-tRNA reductase {ECO:0000256|RuleBase:RU000584}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011415565418752+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02492hemA EC:1.2.1.70 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0033014  tetrapyrrole biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008883  glutamyl-tRNA reductase activity

GO:0050661  NADP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000694.1PF05201.10GlutR_N962561.20E-42
Glyur000011s00000694.1PF01488.15Shikimate_DH2754126.20E-42
Glyur000011s00000694.1PF00745.15GlutR_dimer4265315.20E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.659
SRR1783600control14.754
SRR1783602moderate drought stress15.081
SRR1811619moderate drought stress14.904

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.765
DRR006520Root Summer glycyrrhizin high producing strain19.479
DRR006521Root Winter glycyrrhizin high producing strain18.382
DRR006522Root Winter glycyrrhizin high producing strain17.880
DRR006523Root Summer glycyrrhizin low producing strain25.231
DRR006524Root Summer glycyrrhizin low producing strain25.345
DRR006525Leaf Summer glycyrrhizin high producing strain119.103
DRR006526Leaf Summer glycyrrhizin high producing strain118.702

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.699
SRR2868004Drought Stress(Tissue:root)39.834
SRR2967015Control (Tissue:root)39.241

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave208.135
SRR9715740Leave165.359
SRR9715741Leave151.508
SRR9715739Root20.147
SRR9715742Root27.087
SRR9715743Root27.386

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.382
SRR8749028MeJA induced 9h43.157
SRR8749029MeJA induced 9h31.844
SRR8749030Uninduced32.805
SRR8749031Uninduced21.250
SRR8749032Uninduced27.540

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.901
SRR8400027Control-Root31.057

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved