Gene detail information of Glyur000011s00000702.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65670.1 | 1.00E-93 | indole-3-acetic acid inducible 9 |
| NR | KHN09036.1 | 0 | Auxin-responsive protein IAA8 [Glycine soja] |
| Swissprot | tr|Q38827|IAA9_ARATH | 3.00E-113 | Auxin-responsive protein IAA9 |
| trEMBL | tr|C6TKM2|C6TKM2_SOYBN | 8.00E-176 | Auxin-induced protein {ECO:0000256|RuleBase:RU004549} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 452723 | 458257 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | AUX/IAA |
| EAR motif-containing Proteins | AUX/IAA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000702.1 | PF02309.11 | AUX_IAA | 83 | 361 | 1.60E-84 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 43.334 |
| SRR1783600 | control | 43.454 |
| SRR1783602 | moderate drought stress | 47.044 |
| SRR1811619 | moderate drought stress | 46.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.810 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.303 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.622 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 68.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 68.841 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.605 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 33.640 |
| SRR2868004 | Drought Stress(Tissue:root) | 35.446 |
| SRR2967015 | Control (Tissue:root) | 41.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.003 |
| SRR9715740 | Leave | 4.957 |
| SRR9715741 | Leave | 7.904 |
| SRR9715739 | Root | 58.595 |
| SRR9715742 | Root | 55.131 |
| SRR9715743 | Root | 59.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.251 |
| SRR8749028 | MeJA induced 9h | 5.277 |
| SRR8749029 | MeJA induced 9h | 14.346 |
| SRR8749030 | Uninduced | 0.653 |
| SRR8749031 | Uninduced | 0.726 |
| SRR8749032 | Uninduced | 3.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 86.874 |
| SRR8400027 | Control-Root | 98.573 |