Gene detail information of Glyur000011s00000705.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65640.1 | 2.00E-65 | beta HLH protein 93 |
| NR | XP_003526525.1 | 0 | PREDICTED: transcription factor bHLH93-like [Glycine max] |
| Swissprot | tr|Q9LSL1|BH093_ARATH | 5.00E-78 | Transcription factor bHLH93 |
| trEMBL | tr|I1K9L1|I1K9L1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G09670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 469071 | 471017 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000705.1 | PF00010.21 | HLH | 182 | 226 | 7.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.377 |
| SRR1783600 | control | 11.377 |
| SRR1783602 | moderate drought stress | 3.425 |
| SRR1811619 | moderate drought stress | 3.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.022 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.419 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.115 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.040 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.052 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.832 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.523 |
| SRR2967015 | Control (Tissue:root) | 1.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.667 |
| SRR9715742 | Root | 3.117 |
| SRR9715743 | Root | 2.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.019 |
| SRR8749028 | MeJA induced 9h | 0.461 |
| SRR8749029 | MeJA induced 9h | 0.077 |
| SRR8749030 | Uninduced | 0.341 |
| SRR8749031 | Uninduced | 0.550 |
| SRR8749032 | Uninduced | 0.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 27.087 |
| SRR8400027 | Control-Root | 37.998 |