Gene detail information of Glyur000011s00000709.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24400.10CBL-interacting protein kinase 8
NRXP_007137665.10hypothetical protein PHAVU_009G145400g [Phaseolus vulgaris]
COGYP_002432751.13.00E-29serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01]
Swissprottr|Q9STV4|CIPK8_ARATH0CBL-interacting serine/threonine-protein kinase 8
trEMBLtr|V7AVR9|V7AVR9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW09659.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011495598500560+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000709.1PF00069.20Pkinase92508.20E-62
Glyur000011s00000709.1PF03822.9NAF2913503.30E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.260
SRR1783600control8.279
SRR1783602moderate drought stress8.499
SRR1811619moderate drought stress7.870

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.907
DRR006520Root Summer glycyrrhizin high producing strain11.177
DRR006521Root Winter glycyrrhizin high producing strain13.327
DRR006522Root Winter glycyrrhizin high producing strain12.788
DRR006523Root Summer glycyrrhizin low producing strain14.705
DRR006524Root Summer glycyrrhizin low producing strain14.226
DRR006525Leaf Summer glycyrrhizin high producing strain2.427
DRR006526Leaf Summer glycyrrhizin high producing strain2.368

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.602
SRR2868004Drought Stress(Tissue:root)15.910
SRR2967015Control (Tissue:root)16.649

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.760
SRR9715740Leave5.720
SRR9715741Leave9.657
SRR9715739Root2.886
SRR9715742Root10.441
SRR9715743Root7.863

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.853
SRR8749028MeJA induced 9h7.763
SRR8749029MeJA induced 9h5.092
SRR8749030Uninduced5.434
SRR8749031Uninduced2.184
SRR8749032Uninduced3.461

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.589
SRR8400027Control-Root17.934

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved