Gene detail information of Glyur000011s00000718.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G23450.2 | 8.00E-175 | Protein kinase superfamily protein |
| NR | AES73970.2 | 0 | wall associated kinase-like protein [Medicago truncatula] |
| COG | YP_284821.1 | 6.00E-23 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| Swissprot | tr|Q8RY67|WAKLO_ARATH | 0 | Wall-associated receptor kinase-like 14 (Precursor) |
| trEMBL | tr|G7J4M9|G7J4M9_MEDTR | 0 | Wall associated kinase-like protein {ECO:0000313|EMBL:AES73970.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00011 | 560154 | 565330 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.5.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000011s00000718.1 | PF00069.20 | Pkinase | 333 | 600 | 1.80E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.261 |
| SRR1783600 | control | 45.375 |
| SRR1783602 | moderate drought stress | 18.315 |
| SRR1811619 | moderate drought stress | 18.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.833 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.033 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.882 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.571 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.622 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.475 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.617 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 56.164 |
| SRR2868004 | Drought Stress(Tissue:root) | 49.775 |
| SRR2967015 | Control (Tissue:root) | 49.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.722 |
| SRR9715740 | Leave | 4.980 |
| SRR9715741 | Leave | 5.763 |
| SRR9715739 | Root | 26.831 |
| SRR9715742 | Root | 33.336 |
| SRR9715743 | Root | 29.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.350 |
| SRR8749028 | MeJA induced 9h | 38.180 |
| SRR8749029 | MeJA induced 9h | 35.303 |
| SRR8749030 | Uninduced | 20.721 |
| SRR8749031 | Uninduced | 16.474 |
| SRR8749032 | Uninduced | 15.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 54.709 |
| SRR8400027 | Control-Root | 58.814 |