Gene detail information of Glyur000011s00000721.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42650.10allene oxide synthase
NRXP_004501049.10PREDICTED: allene oxide synthase, chloroplastic-like [Cicer arietinum]
COGYP_002501570.12.00E-19heme peroxidase [Methylobacterium nodulans ORS 2060]
Swissprottr|P48417|CP74_LINUS0Allene oxide synthase, chloroplastic (Precursor)
trEMBLtr|I1JTE7|I1JTE7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G03740.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00011569380570933-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP74A


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01723AOS EC:4.2.1.92 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004497  monooxygenase activity

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000011s00000721.1PF00067.17p4503464462.40E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.195
SRR1783600control2.221
SRR1783602moderate drought stress0.659
SRR1811619moderate drought stress0.639

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.140
DRR006520Root Summer glycyrrhizin high producing strain0.138
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.213
DRR006524Root Summer glycyrrhizin low producing strain0.112
DRR006525Leaf Summer glycyrrhizin high producing strain2.593
DRR006526Leaf Summer glycyrrhizin high producing strain2.544

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.714
SRR2868004Drought Stress(Tissue:root)0.679
SRR2967015Control (Tissue:root)0.826

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.138
SRR9715740Leave2.856
SRR9715741Leave12.048
SRR9715739Root10.167
SRR9715742Root5.393
SRR9715743Root8.967

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.750
SRR8749028MeJA induced 9h1.866
SRR8749029MeJA induced 9h2.443
SRR8749030Uninduced1.924
SRR8749031Uninduced4.271
SRR8749032Uninduced1.461

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.838
SRR8400027Control-Root7.008

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved