Gene detail information of Glyur000012s00000527.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G33150.20lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
NRXP_003609929.10Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Medicago truncatula]
COGYP_004451018.12.00E-65saccharopine dehydrogenase [Haliscomenobacter hydrossis DSM 1100]
Swissprottr|Q9SMZ4|AASS_ARATH0Saccharopine dehydrogenase
trEMBLtr|G7JS28|G7JS28_MEDTR0Lysine-ketoglutarate reductase/saccharopine dehydrogenase {ECO:0000313|EMBL:AES92126.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000127145881356+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14157AASS EC:1.5.1.8 1.5.1.9 Lysine degradation map00310


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000527.2PF05222.10AlaDh_PNT_N81413.60E-22
Glyur000012s00000527.2PF01262.16AlaDh_PNT_C1813796.90E-43
Glyur000012s00000527.2PF04455.7Saccharop_dh_N4625641.90E-24
Glyur000012s00000527.2PF03435.13Saccharop_dh57210251.50E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.028
SRR1783600control15.112
SRR1783602moderate drought stress22.907
SRR1811619moderate drought stress22.798

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.796
DRR006520Root Summer glycyrrhizin high producing strain16.674
DRR006521Root Winter glycyrrhizin high producing strain38.560
DRR006522Root Winter glycyrrhizin high producing strain37.701
DRR006523Root Summer glycyrrhizin low producing strain16.602
DRR006524Root Summer glycyrrhizin low producing strain16.589
DRR006525Leaf Summer glycyrrhizin high producing strain10.646
DRR006526Leaf Summer glycyrrhizin high producing strain10.534

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.666
SRR2868004Drought Stress(Tissue:root)51.681
SRR2967015Control (Tissue:root)85.573

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.110
SRR9715740Leave22.027
SRR9715741Leave31.418
SRR9715739Root3.283
SRR9715742Root12.901
SRR9715743Root11.848

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.111
SRR8749028MeJA induced 9h38.103
SRR8749029MeJA induced 9h11.459
SRR8749030Uninduced25.126
SRR8749031Uninduced20.620
SRR8749032Uninduced15.410

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.647
SRR8400027Control-Root13.431

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved