Gene detail information of Glyur000012s00000545.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17600.13.00E-32indole-3-acetic acid inducible 31
NRKHN45021.13.52E-102Auxin-responsive protein IAA31 [Glycine soja]
Swissprottr|Q8H174|IAA31_ARATH2.00E-39Auxin-responsive protein IAA31
trEMBLtr|I1LYD6|I1LYD6_SOYBN3.00E-102Auxin-induced protein {ECO:0000256|RuleBase:RU004549}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00012200209201280+


Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA
EAR motif-containing ProteinsAUX/IAA


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0046983  protein dimerization activity

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000545.1PF02309.11AUX_IAA691945.70E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.889
SRR1783600control0.775
SRR1783602moderate drought stress1.572
SRR1811619moderate drought stress1.216

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.358
DRR006520Root Summer glycyrrhizin high producing strain1.584
DRR006521Root Winter glycyrrhizin high producing strain2.609
DRR006522Root Winter glycyrrhizin high producing strain2.502
DRR006523Root Summer glycyrrhizin low producing strain1.676
DRR006524Root Summer glycyrrhizin low producing strain1.720
DRR006525Leaf Summer glycyrrhizin high producing strain1.362
DRR006526Leaf Summer glycyrrhizin high producing strain1.405

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.879
SRR2868004Drought Stress(Tissue:root)1.176
SRR2967015Control (Tissue:root)0.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.595
SRR9715740Leave0.772
SRR9715741Leave0.405
SRR9715739Root0.831
SRR9715742Root1.073
SRR9715743Root1.329

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.013
SRR8749028MeJA induced 9h145.886
SRR8749029MeJA induced 9h125.684
SRR8749030Uninduced64.155
SRR8749031Uninduced108.901
SRR8749032Uninduced167.544

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.612
SRR8400027Control-Root1.679

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved