Gene detail information of Glyur000012s00000551.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G62300.1 | 1.00E-42 | WRKY family transcription factor |
| NR | XP_003550582.1 | 2.98E-128 | PREDICTED: WRKY transcription factor 6-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9C519|WRKY6_ARATH | 2.00E-55 | WRKY transcription factor 6 |
| trEMBL | tr|I1MS01|I1MS01_SOYBN | 1.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G04710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 234399 | 237765 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000551.1 | PF03106.10 | WRKY | 215 | 273 | 1.20E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.240 |
| SRR1783600 | control | 0.237 |
| SRR1783602 | moderate drought stress | 0.089 |
| SRR1811619 | moderate drought stress | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.562 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.807 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.752 |
| SRR2967015 | Control (Tissue:root) | 6.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.790 |
| SRR9715740 | Leave | 10.306 |
| SRR9715741 | Leave | 15.151 |
| SRR9715739 | Root | 0.060 |
| SRR9715742 | Root | 0.070 |
| SRR9715743 | Root | 0.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.001 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.035 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.331 |
| SRR8400027 | Control-Root | 1.490 |