Gene detail information of Glyur000012s00000553.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17180.1 | 1.00E-74 | glutathione S-transferase TAU 25 |
| NR | XP_004508074.1 | 1.10E-132 | PREDICTED: glutathione S-transferase 3-like [Cicer arietinum] |
| COG | YP_007096787.1 | 2.00E-24 | glutathione S-transferase [Chamaesiphon minutus PCC 6605] |
| Swissprot | tr|Q03666|GSTX4_TOBAC | 3.00E-97 | Probable glutathione S-transferase |
| trEMBL | tr|G7JR24|G7JR24_MEDTR | 1.00E-129 | Glutathione S-transferase, amino-terminal domain protein {ECO:0000313|EMBL:AES92091.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 241010 | 242032 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000012s00000553.1 | PF13417.1 | GST_N_3 | 8 | 79 | 2.30E-14 |
| Glyur000012s00000553.1 | PF00043.20 | GST_C | 114 | 193 | 2.60E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.421 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.002 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.531 |
| SRR9715740 | Leave | 0.221 |
| SRR9715741 | Leave | 0.368 |
| SRR9715739 | Root | 0.016 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.092 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.232 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.989 |
| SRR8400027 | Control-Root | 0.489 |