Gene detail information of Glyur000012s00000555.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G78380.1 | 1.00E-10 | glutathione S-transferase TAU 19 |
| NR | AFV96162.1 | 3.28E-15 | glutathion-S-transferase a, partial [Trifolium repens] |
| Swissprot | tr|P46417|GSTX3_SOYBN | 2.00E-13 | Glutathione S-transferase 3 |
| trEMBL | tr|U5IC20|U5IC20_TRIRP | 1.00E-15 | Glutathion-S-transferase a {ECO:0000313|EMBL:AFV96162.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00012 | 244379 | 246430 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.067 |
| SRR1783600 | control | 0.193 |
| SRR1783602 | moderate drought stress | 0.638 |
| SRR1811619 | moderate drought stress | 0.400 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.117 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.194 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.258 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.254 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.298 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.453 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.099 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.191 |
| SRR2967015 | Control (Tissue:root) | 0.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.052 |
| SRR9715741 | Leave | 0.022 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.223 |
| SRR8749028 | MeJA induced 9h | 0.096 |
| SRR8749029 | MeJA induced 9h | 0.110 |
| SRR8749030 | Uninduced | 0.002 |
| SRR8749031 | Uninduced | 0.434 |
| SRR8749032 | Uninduced | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.081 |
| SRR8400027 | Control-Root | 0.063 |