Gene detail information of Glyur000012s00000570.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17510.15.00E-158CBL-interacting protein kinase 1
NRXP_003609876.10CBL-interacting protein kinase [Medicago truncatula]
COGYP_004266623.12.00E-32serine/threonine protein kinase with PASTA sensor(s) [Syntrophobotulus glycolicus DSM 8271]
Swissprottr|Q8RWC9|CIPK1_ARATH0CBL-interacting serine/threonine-protein kinase 1
trEMBLtr|G7JR06|G7JR06_MEDTR0CBL-interacting kinase {ECO:0000313|EMBL:AES92073.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00012344518350679+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07198PRKAA, AMPK EC:2.7.11.11 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Tight junctionmap04530
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Adipocytokine signaling pathwaymap04920
Oxytocin signaling pathwaymap04921
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - multiple speciesmap04213
Circadian rhythmmap04710
Fluid shear stress and atherosclerosismap05418
Hypertrophic cardiomyopathy (HCM)map05410
Non-alcoholic fatty liver disease (NAFLD)map04932
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000570.1PF00069.20Pkinase92131.90E-64
Glyur000012s00000570.1PF03822.9NAF2823428.00E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.279
SRR1783600control3.289
SRR1783602moderate drought stress3.201
SRR1811619moderate drought stress3.439

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.859
DRR006520Root Summer glycyrrhizin high producing strain5.654
DRR006521Root Winter glycyrrhizin high producing strain0.285
DRR006522Root Winter glycyrrhizin high producing strain0.225
DRR006523Root Summer glycyrrhizin low producing strain2.338
DRR006524Root Summer glycyrrhizin low producing strain2.315
DRR006525Leaf Summer glycyrrhizin high producing strain9.391
DRR006526Leaf Summer glycyrrhizin high producing strain9.977

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.966
SRR2868004Drought Stress(Tissue:root)39.138
SRR2967015Control (Tissue:root)22.996

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.577
SRR9715740Leave21.992
SRR9715741Leave13.978
SRR9715739Root2.027
SRR9715742Root4.035
SRR9715743Root4.111

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.947
SRR8749028MeJA induced 9h16.183
SRR8749029MeJA induced 9h7.229
SRR8749030Uninduced10.654
SRR8749031Uninduced6.008
SRR8749032Uninduced8.256

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.968
SRR8400027Control-Root12.280

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved