Gene detail information of Glyur000012s00000586.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56720.32.00E-172Protein kinase superfamily protein
NRAFK47437.10unknown [Medicago truncatula]
COGYP_007201433.12.00E-29protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q8LEB6|Y5185_ARATH0Probable receptor-like protein kinase At5g18500
trEMBLtr|I3T4J5|I3T4J5_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK47437.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00012395723398964+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000586.1PF00069.20Pkinase1774441.80E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.652
SRR1783600control8.622
SRR1783602moderate drought stress4.296
SRR1811619moderate drought stress4.278

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.055
DRR006520Root Summer glycyrrhizin high producing strain9.081
DRR006521Root Winter glycyrrhizin high producing strain0.122
DRR006522Root Winter glycyrrhizin high producing strain0.126
DRR006523Root Summer glycyrrhizin low producing strain11.076
DRR006524Root Summer glycyrrhizin low producing strain11.339
DRR006525Leaf Summer glycyrrhizin high producing strain6.113
DRR006526Leaf Summer glycyrrhizin high producing strain6.068

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.823
SRR2868004Drought Stress(Tissue:root)35.085
SRR2967015Control (Tissue:root)24.546

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.894
SRR9715740Leave4.792
SRR9715741Leave6.779
SRR9715739Root1.847
SRR9715742Root12.410
SRR9715743Root9.256

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.307
SRR8749028MeJA induced 9h38.684
SRR8749029MeJA induced 9h28.299
SRR8749030Uninduced20.779
SRR8749031Uninduced11.634
SRR8749032Uninduced11.324

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.147
SRR8400027Control-Root32.406

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved