Gene detail information of Glyur000012s00000626.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G49620.17.00E-63myb domain protein 78
NRKEH32365.11.48E-138myb transcription factor [Medicago truncatula]
Swissprottr|Q9LDE1|MY108_ARATH9.00E-80Transcription factor MYB108
trEMBLtr|A0A072V2Q6|A0A072V2Q6_MEDTR6.00E-139Myb transcription factor {ECO:0000313|EMBL:KEH32365.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00012666459668140+


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000012s00000626.1PF00249.26Myb_DNA-binding44916.50E-14
Glyur000012s00000626.1PF00249.26Myb_DNA-binding971402.80E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.040
SRR1783600control1.033
SRR1783602moderate drought stress1.044
SRR1811619moderate drought stress1.077

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.247
DRR006520Root Summer glycyrrhizin high producing strain0.183
DRR006521Root Winter glycyrrhizin high producing strain4.495
DRR006522Root Winter glycyrrhizin high producing strain4.464
DRR006523Root Summer glycyrrhizin low producing strain2.215
DRR006524Root Summer glycyrrhizin low producing strain2.298
DRR006525Leaf Summer glycyrrhizin high producing strain0.471
DRR006526Leaf Summer glycyrrhizin high producing strain0.237

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.384
SRR2868004Drought Stress(Tissue:root)5.619
SRR2967015Control (Tissue:root)9.254

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.869
SRR9715740Leave0.961
SRR9715741Leave2.693
SRR9715739Root0.808
SRR9715742Root2.016
SRR9715743Root1.825

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h209.509
SRR8749028MeJA induced 9h265.748
SRR8749029MeJA induced 9h155.498
SRR8749030Uninduced53.759
SRR8749031Uninduced25.279
SRR8749032Uninduced54.962

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.980
SRR8400027Control-Root0.615

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved