Gene detail information of Glyur000013s00003187.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57040.1 | 6.00E-65 | response regulator 9 |
| NR | XP_007162123.1 | 5.80E-136 | hypothetical protein PHAVU_001G125800g [Phaseolus vulgaris] |
| COG | YP_723495.1 | 9.00E-16 | adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101] |
| Swissprot | tr|O80366|ARR9_ARATH | 1.00E-102 | Two-component response regulator ARR9 |
| trEMBL | tr|V7CVB1|V7CVB1_PHAVU | 2.00E-136 | Uncharacterized protein {ECO:0000313|EMBL:ESW34117.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00013 | 57394 | 59479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000013s00003187.1 | PF00072.19 | Response_reg | 11 | 139 | 5.60E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.655 |
| SRR1783600 | control | 13.588 |
| SRR1783602 | moderate drought stress | 10.124 |
| SRR1811619 | moderate drought stress | 10.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 48.114 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 47.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.730 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.122 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.722 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.817 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 46.407 |
| SRR2868004 | Drought Stress(Tissue:root) | 41.873 |
| SRR2967015 | Control (Tissue:root) | 50.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.363 |
| SRR9715740 | Leave | 4.616 |
| SRR9715741 | Leave | 2.802 |
| SRR9715739 | Root | 0.466 |
| SRR9715742 | Root | 4.916 |
| SRR9715743 | Root | 4.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.909 |
| SRR8749028 | MeJA induced 9h | 1.368 |
| SRR8749029 | MeJA induced 9h | 0.544 |
| SRR8749030 | Uninduced | 0.456 |
| SRR8749031 | Uninduced | 0.337 |
| SRR8749032 | Uninduced | 0.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 34.858 |
| SRR8400027 | Control-Root | 50.938 |