Gene detail information of Glyur000013s00003199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14800.11.00E-101pyrroline-5- carboxylate (P5C) reductase
NRXP_004493414.10PREDICTED: pyrroline-5-carboxylate reductase-like [Cicer arietinum]
COGYP_008070955.11.00E-76pyrroline-5-carboxylate reductase [Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1]
Swissprottr|Q04708|P5CR_PEA2.00E-177Pyrroline-5-carboxylate reductase
trEMBLtr|K7KEQ2|K7KEQ2_SOYBN7.00E-175Pyrroline-5-carboxylate reductase {ECO:0000256|RuleBase:RU003903}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013114218118146+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00286proC EC:1.5.1.2 Biosynthesis of amino acids map01230
Arginine and proline metabolismmap00330


Gene Ontology

biological_process

GO:0006561  proline biosynthetic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004735  pyrroline-5-carboxylate reductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003199.1PF03807.12F420_oxidored131066.90E-20
Glyur000013s00003199.1PF14748.1P5CR_dimer1682721.30E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control82.734
SRR1783600control82.828
SRR1783602moderate drought stress71.951
SRR1811619moderate drought stress71.482

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain76.453
DRR006520Root Summer glycyrrhizin high producing strain75.985
DRR006521Root Winter glycyrrhizin high producing strain20.984
DRR006522Root Winter glycyrrhizin high producing strain20.804
DRR006523Root Summer glycyrrhizin low producing strain31.252
DRR006524Root Summer glycyrrhizin low producing strain30.671
DRR006525Leaf Summer glycyrrhizin high producing strain40.059
DRR006526Leaf Summer glycyrrhizin high producing strain40.408

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.046
SRR2868004Drought Stress(Tissue:root)37.587
SRR2967015Control (Tissue:root)35.388

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.199
SRR9715740Leave32.139
SRR9715741Leave31.778
SRR9715739Root50.375
SRR9715742Root44.285
SRR9715743Root42.773

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.901
SRR8749028MeJA induced 9h13.943
SRR8749029MeJA induced 9h16.610
SRR8749030Uninduced5.786
SRR8749031Uninduced2.936
SRR8749032Uninduced4.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.261
SRR8400027Control-Root44.990

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved