Gene detail information of Glyur000013s00003209.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G04140.10glutamate synthase 1
NRXP_004493407.10PREDICTED: ferredoxin-dependent glutamate synthase 1, chloroplastic-like isoform X1 [Cicer arietinum]
COGYP_007110350.10glutamate synthase [Geitlerinema sp. PCC 7407]
Swissprottr|Q43155|GLTB_SPIOL0Ferredoxin-dependent glutamate synthase, chloroplastic
trEMBLtr|I1JN60|I1JN60_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G28410.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013175859197165-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00284E1.4.7.1 EC:1.4.7.1 Glyoxylate and dicarboxylate metabolism map00630
Nitrogen metabolismmap00910


Gene Ontology

biological_process

GO:0006537  glutamate biosynthetic process

GO:0006807  nitrogen compound metabolic process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0015930  glutamate synthase activity

GO:0016491  oxidoreductase activity

GO:0016638  oxidoreductase activity, acting on the CH-NH2 group of donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003209.1PF00310.16GATase_21024402.50E-113
Glyur000013s00003209.1PF04898.9Glu_syn_central5147955.80E-109
Glyur000013s00003209.1PF01645.12Glu_synthase85312372.00E-162
Glyur000013s00003209.1PF01493.14GXGXG131815092.80E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.865
SRR1783600control17.919
SRR1783602moderate drought stress19.785
SRR1811619moderate drought stress19.653

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.712
DRR006520Root Summer glycyrrhizin high producing strain11.740
DRR006521Root Winter glycyrrhizin high producing strain19.564
DRR006522Root Winter glycyrrhizin high producing strain19.072
DRR006523Root Summer glycyrrhizin low producing strain13.899
DRR006524Root Summer glycyrrhizin low producing strain14.215
DRR006525Leaf Summer glycyrrhizin high producing strain429.688
DRR006526Leaf Summer glycyrrhizin high producing strain428.182

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)96.067
SRR2868004Drought Stress(Tissue:root)114.773
SRR2967015Control (Tissue:root)83.696

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave262.376
SRR9715740Leave367.082
SRR9715741Leave301.239
SRR9715739Root12.230
SRR9715742Root44.246
SRR9715743Root37.833

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.445
SRR8749028MeJA induced 9h32.106
SRR8749029MeJA induced 9h16.518
SRR8749030Uninduced14.496
SRR8749031Uninduced10.274
SRR8749032Uninduced10.624

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root64.370
SRR8400027Control-Root53.220

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved