Gene detail information of Glyur000013s00003218.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06950.42.00E-108bZIP transcription factor family protein
NRXP_004493401.10PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like [Cicer arietinum]
Swissprottr|O24160|TGA21_TOBAC0TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBLtr|G7KQS1|G7KQS1_MEDTR0Leucine zipper transcription factor {ECO:0000313|EMBL:AES81211.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013252775258977+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003218.1PF00170.16bZIP_11762183.40E-07
Glyur000013s00003218.1PF14144.1DOG12593378.00E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.108
SRR1783600control29.929
SRR1783602moderate drought stress39.688
SRR1811619moderate drought stress39.592

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain47.158
DRR006520Root Summer glycyrrhizin high producing strain47.218
DRR006521Root Winter glycyrrhizin high producing strain37.654
DRR006522Root Winter glycyrrhizin high producing strain36.299
DRR006523Root Summer glycyrrhizin low producing strain64.900
DRR006524Root Summer glycyrrhizin low producing strain63.971
DRR006525Leaf Summer glycyrrhizin high producing strain16.481
DRR006526Leaf Summer glycyrrhizin high producing strain16.808

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.247
SRR2868004Drought Stress(Tissue:root)99.378
SRR2967015Control (Tissue:root)104.322

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.079
SRR9715740Leave39.158
SRR9715741Leave57.202
SRR9715739Root24.699
SRR9715742Root60.245
SRR9715743Root54.453

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.003
SRR8749028MeJA induced 9h83.081
SRR8749029MeJA induced 9h63.335
SRR8749030Uninduced42.396
SRR8749031Uninduced75.997
SRR8749032Uninduced54.016

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.211
SRR8400027Control-Root70.358

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved