Gene detail information of Glyur000013s00003231.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G41140.10CDPK-related kinase 1
NRXP_004493390.10PREDICTED: CDPK-related kinase 7-like [Cicer arietinum]
COGYP_003339135.15.00E-18serine/threonine protein kinase-like protein [Streptosporangium roseum DSM 43021]
Swissprottr|O80673|CAMK1_ARATH0CDPK-related kinase 1
trEMBLtr|Q2HT01|Q2HT01_MEDTR0Protein kinase; Calcium-binding EF-hand {ECO:0000313|EMBL:ABD33022.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013353916360029-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003231.1PF00069.20Pkinase1372921.10E-36
Glyur000013s00003231.1PF00069.20Pkinase2993494.50E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.657
SRR1783600control25.323
SRR1783602moderate drought stress21.848
SRR1811619moderate drought stress21.606

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.858
DRR006520Root Summer glycyrrhizin high producing strain36.701
DRR006521Root Winter glycyrrhizin high producing strain9.845
DRR006522Root Winter glycyrrhizin high producing strain9.637
DRR006523Root Summer glycyrrhizin low producing strain35.545
DRR006524Root Summer glycyrrhizin low producing strain35.261
DRR006525Leaf Summer glycyrrhizin high producing strain25.904
DRR006526Leaf Summer glycyrrhizin high producing strain26.140

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.342
SRR2868004Drought Stress(Tissue:root)29.398
SRR2967015Control (Tissue:root)35.269

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.773
SRR9715740Leave29.577
SRR9715741Leave31.003
SRR9715739Root14.147
SRR9715742Root38.056
SRR9715743Root33.244

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.146
SRR8749028MeJA induced 9h15.602
SRR8749029MeJA induced 9h15.007
SRR8749030Uninduced2.553
SRR8749031Uninduced1.635
SRR8749032Uninduced2.502

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.476
SRR8400027Control-Root47.949

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved