Gene detail information of Glyur000013s00003257.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10760.11.00E-68Homeodomain-like superfamily protein
NRXP_003624917.11.58E-142Two-component response regulator ARR1 [Medicago truncatula]
Swissprottr|Q9SNB4|PCL1_ARATH2.00E-49Transcription factor LUX
trEMBLtr|A2Q6F5|A2Q6F5_MEDTR6.00E-143MYB-like transcription factor family protein {ECO:0000313|EMBL:AES81135.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013552986553909+


Gene family

Gene familysubfamily
Transcription Factors FamilyG2-like


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003257.1PF00249.26Myb_DNA-binding1031538.30E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.530
SRR1783600control39.792
SRR1783602moderate drought stress43.719
SRR1811619moderate drought stress51.996

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.354
DRR006520Root Summer glycyrrhizin high producing strain31.993
DRR006521Root Winter glycyrrhizin high producing strain33.317
DRR006522Root Winter glycyrrhizin high producing strain32.127
DRR006523Root Summer glycyrrhizin low producing strain20.351
DRR006524Root Summer glycyrrhizin low producing strain21.131
DRR006525Leaf Summer glycyrrhizin high producing strain40.864
DRR006526Leaf Summer glycyrrhizin high producing strain37.021

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.353
SRR2868004Drought Stress(Tissue:root)49.449
SRR2967015Control (Tissue:root)46.065

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.792
SRR9715740Leave23.650
SRR9715741Leave27.156
SRR9715739Root33.925
SRR9715742Root44.137
SRR9715743Root38.999

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.047
SRR8749028MeJA induced 9h32.963
SRR8749029MeJA induced 9h18.027
SRR8749030Uninduced8.941
SRR8749031Uninduced12.040
SRR8749032Uninduced11.457

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.786
SRR8400027Control-Root34.169

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved