Gene detail

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Gene detail information of Glyur000013s00003262.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G40950.1	7.00E-138	Basic-leucine zipper (bZIP) transcription factor family protein
NR	XP_004493333.1	0	PREDICTED: uncharacterized protein LOC101504999 [Cicer arietinum]
Swissprot	tr\|P14233\|TGA1B_TOBAC	9.00E-31	TGACG-sequence-specific DNA-binding protein TGA-1B (Fragment)
trEMBL	tr\|V7CV37\|V7CV37_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34042.1} (Fragment)

Sequence

Transcript Sequence

>Glyur000013s00003262.1
TAGTTCACAGAAACTTATCCACACCCGGTTCCGTGGCGCGTGATCCGACGCCCACGACCTCAAATAACGAGCGAAACCTCAAAACCTCAAAATTCTGAAAACCCTGTGTCTGTGTTNGTTTTTGGTCGTCGTTGAACCTCGAAGAAGAAGCCTTCATCATTCTCCATTCATTCCCCGTTTACTTTACCCCCCTCCATCCATGCCGGATCCAGTGCCGGCCGGAGATCCACCGGCACCCGATCTCGATTTCGCCGACGAATTCTCCGGCGACTTCCACAACCTCCCCATCCCCTCCATGGACTATTTCTTCCACAACGACGAAACCCTACCCTCTGAGCCCTTCCCCTCCGATCTCGATTTCGCCATGGATTTCGGCGAAACCGGAGACTTCGAAATCACCTTCGACGACCTCGACAACCTCTGCATCCCCTCCGACGCCGAGGATTTCCTTCTCCCCGATGACGCATGCAACCCTAACTTCGCCTCAATTTCGCCGCCGATCGCCGATCCCGGTGATTCCTCCCCGAAGAATTCCAATTGCGGCATAGCTGACTCCGATTCGCCGGAATCCGGCGCTTCTGCGGTTTCCGGAGACTCTAGGTTTTTCAATTCGGATAATTCGGGGAAACAGGACTCGCACAACTCGGTCGATGTCAAAGCCTCGAGCTTCCCGTCGCCGGGTTCCGAGTCATTCGATCGGGAGGAGTCTTCGAATGGACCGGTTTCGTCGCAGGGTTCAGGTGACGGTGGGTCGGGTGTATACGAAGCCATGAACTCGCCCTCACCTGATTCTGGCCGTTACGAGAGGGACATTATTTCATCCTCTCACCACCATGCAGCACATGCAACAATTGAGGAAAAGGGTGATGTGAAATTGGAGGAAAAAGTTGGTAAAGTTGGTTGTGATCTGAAGAGGAAGAAGGAGCACGTGCACGGCGAAGAGAATAGAACCACCAAGTTCAAAAGGACCCCCTCTTCAGTGGCCGAAAACAAGTCCCAGCAGCAACAACAACCTCAATGCGGTGTCAACAATGGTTCTGATGGTGATGAGGATGAGAAGAGGAAGGCGAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCGAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCCACCATTGCTGATCTGAGTAGTAAGATTTCCTTTGTGATGGCTGAGAATGCTACACTTAGACAGCAACTTGGTGCTGGTGTGATGTGTCCACCACCACAAGCTCATGGAATGTACCCTCATCATGCTCCAATGCCACCCATGCCTTATCCTTGGGTCCCTTGTGCTCCCTATGTTGTCAAGCCTCAAGGGTCTAATATTCCTTTGGTTCCCATTCCCAGATTGAAGCCTCAGCAACCTGCTGCAGCCTCCAAGAGTAGTAAGAAGAACGAGGGTAAGAAGACTGAGGGGAAAGCTAAGAAGGTTGCCAGCATGAGTTTGTTGGGTTTGTTTCTCTTTATCTTGCTTTTTGGTGGGTTTGCTCCTCTGGTTGATGTTATGTTTGGAGGTTTAGTTGATGATGTTCCTGGTAGGTCTAGTTATGTTAGTAGTGATGGGTTTTATGGTCATTGGAATGGATCTGAAAGGGATGGGGAAGTGGGGTTTTACAATGGAAGGTTTGGTATTTCTTCTCATAGGAAGGATAATTATGAGAGAGGGCGGATACTAGGAGAAGAAAAAATGGATGAAGGGAAAGGGAAAGACCCGAATGGTTTCGTTCATCGGGACAATTCCAGTGAGCCTCTTGTTGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGGAACTTGATCATCCATTCTATTATGGCCAGTGAGAAAGCCATGGCGTCTCAAACTAATGAGGCAAAGAAGGACAAGGGTGAAACTGGTTTGGCCATTCCTAAAGACTGGGATTCTGCATTGGCTATTCCTGGGGTTGGGAGAAATAGAGGGCATCATCCACATGTGTATAGGGTAACTCCTGAACAGAGGAGGGCTCTTGGCTCTGGTTCAGCCAAAACTTTGAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGTACTGAAGTTTTCCAGTTTGATGTTTCTCCAACTCCAGGAGCTATAGTTCCGGCGACATCAGTAGCCAATGTTTCTTCCGGGAACCNTAGGAACGCTACCACTGTCAACAAGAGCAGGAACAGAAGAATCCTGCACAGTCTCCCGGATCCACTCCCCGGATCCAGTCTGAACGTGACTGAAGAACATGCAAGAAACTTGCCGAAAGACCACCTACATGGCAATAAATCTTCTATGGTGGTTTCAGTGCTTATTGATCCCAAAGAGGCTGGAGATGGTGATGTTGATGGCATGATGGCTCCAAAGTCTCTCTCTCGGATTTTTGTGGTTGTGCTTATAGATAGTGTCAAGTATGTCACTTACTCATGTGGTCTTCCAAGGGCTTCTACCCCTCTGGTGACTGCTTATGTATGAGACATCCTTCCTCCTCCTCCTCCTCCAGTAAAACATTTTGATACAAAGCCTTATCTAACCCCGAGTTCTAGTTTATGTAACAATGGATGTGACTGGGAGAGAAAGAAACTCAGCTCCAGTTTTGTACATAGCAACATATTTAAAATAGGATGCCTTATGTGTACCCCCAAAAAAGTAGCGAAAATTTTAGAAGCCGGCCTTGAATGGG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00013	573227	576852	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000013s00003262.1	PF00170.16	bZIP_1	284	344	1.80E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	55.832
SRR1783600	control	55.409
SRR1783602	moderate drought stress	55.810
SRR1811619	moderate drought stress	55.429

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	59.505
DRR006520	Root Summer glycyrrhizin high producing strain	58.851
DRR006521	Root Winter glycyrrhizin high producing strain	38.086
DRR006522	Root Winter glycyrrhizin high producing strain	36.914
DRR006523	Root Summer glycyrrhizin low producing strain	41.134
DRR006524	Root Summer glycyrrhizin low producing strain	40.469
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.627
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.499

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	35.916
SRR2868004	Drought Stress(Tissue:root)	41.943
SRR2967015	Control (Tissue:root)	40.871

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	31.406
SRR9715740	Leave	31.782
SRR9715741	Leave	45.150
SRR9715739	Root	75.362
SRR9715742	Root	87.309
SRR9715743	Root	83.508

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	35.128
SRR8749028	MeJA induced 9h	38.367
SRR8749029	MeJA induced 9h	37.140
SRR8749030	Uninduced	18.664
SRR8749031	Uninduced	28.381
SRR8749032	Uninduced	38.230

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	40.586
SRR8400027	Control-Root	42.688