Gene detail information of Glyur000013s00003277.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40890.10cytochrome P450, family 98, subfamily A, polypeptide 3
NRAEV93473.104-coumarate 3-hydroxylase [Caragana korshinskii]
COGYP_008153173.19.00E-29hypothetical protein SCE1572_34000 [Sorangium cellulosum So0157-2]
Swissprottr|O48922|C98A2_SOYBN0Cytochrome P450 98A2
trEMBLtr|V9I5V0|V9I5V0_9FABA04-coumarate 3-hydroxylase {ECO:0000313|EMBL:AEV93473.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00013652911657954+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP98A3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09754CYP98A, C3'H EC:1.14.13.36 Phenylpropanoid biosynthesis map00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000013s00003277.1PF00067.17p450294692.50E-95


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.255
SRR1783600control56.145
SRR1783602moderate drought stress46.843
SRR1811619moderate drought stress46.155

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.583
DRR006520Root Summer glycyrrhizin high producing strain34.637
DRR006521Root Winter glycyrrhizin high producing strain25.125
DRR006522Root Winter glycyrrhizin high producing strain24.882
DRR006523Root Summer glycyrrhizin low producing strain47.248
DRR006524Root Summer glycyrrhizin low producing strain47.537
DRR006525Leaf Summer glycyrrhizin high producing strain9.731
DRR006526Leaf Summer glycyrrhizin high producing strain10.020

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)124.959
SRR2868004Drought Stress(Tissue:root)127.898
SRR2967015Control (Tissue:root)92.772

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.867
SRR9715740Leave57.887
SRR9715741Leave78.069
SRR9715739Root78.225
SRR9715742Root110.879
SRR9715743Root97.742

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h129.349
SRR8749028MeJA induced 9h197.742
SRR8749029MeJA induced 9h92.977
SRR8749030Uninduced49.631
SRR8749031Uninduced28.010
SRR8749032Uninduced50.832

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.992
SRR8400027Control-Root62.360

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved