Gene detail information of Glyur000014s00002486.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45300.12.00E-14RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
NRBAE20403.11.61E-165-enolpyruvylshikimate-3-phosphate synthase [Lactuca sativa]
COGYP_008158565.13.00E-093-phosphoshikimate 1-carboxyvinyltransferase [Serratia plymuthica S13]
Swissprottr|P23281|AROA2_TOBAC2.00E-173-phosphoshikimate 1-carboxyvinyltransferase 2 (Fragment)
trEMBLtr|W5HE54|W5HE54_WHEAT5.00E-17Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_7AS_4250651DD.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000146474467626-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00800aroA EC:2.5.1.19 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0016765  transferase activity, transferring alkyl or aryl (other than methyl) groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000014s00002486.1PF00275.15EPSP_synthase43818.70E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.055
SRR1783600control7.172
SRR1783602moderate drought stress6.292
SRR1811619moderate drought stress3.736

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.787
DRR006520Root Summer glycyrrhizin high producing strain9.489
DRR006521Root Winter glycyrrhizin high producing strain8.310
DRR006522Root Winter glycyrrhizin high producing strain9.389
DRR006523Root Summer glycyrrhizin low producing strain15.436
DRR006524Root Summer glycyrrhizin low producing strain16.865
DRR006525Leaf Summer glycyrrhizin high producing strain2.862
DRR006526Leaf Summer glycyrrhizin high producing strain3.408

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.240
SRR2868004Drought Stress(Tissue:root)30.268
SRR2967015Control (Tissue:root)29.347

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.973
SRR9715740Leave8.998
SRR9715741Leave9.012
SRR9715739Root7.640
SRR9715742Root12.947
SRR9715743Root10.686

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.856
SRR8749028MeJA induced 9h13.979
SRR8749029MeJA induced 9h12.560
SRR8749030Uninduced34.972
SRR8749031Uninduced29.170
SRR8749032Uninduced16.280

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.648
SRR8400027Control-Root19.450

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved