Gene detail information of Glyur000014s00002493.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20970.1 | 2.00E-26 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003540915.1 | 3.95E-104 | PREDICTED: transcription factor bHLH36-like [Glycine max] |
| Swissprot | tr|Q9FLI1|BH036_ARATH | 3.00E-11 | Transcription factor bHLH36 |
| trEMBL | tr|I1LS39|I1LS39_SOYBN | 1.00E-104 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G12880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 112364 | 113458 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002493.1 | PF00010.21 | HLH | 28 | 75 | 1.10E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.092 |
| SRR1783600 | control | 0.061 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.273 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.270 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.140 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.345 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.303 |
| SRR9715740 | Leave | 2.664 |
| SRR9715741 | Leave | 14.310 |
| SRR9715739 | Root | 0.170 |
| SRR9715742 | Root | 2.976 |
| SRR9715743 | Root | 2.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.077 |
| SRR8749030 | Uninduced | 0.472 |
| SRR8749031 | Uninduced | 0.283 |
| SRR8749032 | Uninduced | 0.203 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.779 |
| SRR8400027 | Control-Root | 0.280 |