Gene detail information of Glyur000014s00002494.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22930.12.00E-111pyrimidin 4
NRXP_006413599.11.86E-145hypothetical protein EUTSA_v10025474mg [Eutrema salsugineum]
COGYP_008547335.12.00E-102dihydroorotase [Sulfuricella denitrificans skB26]
Swissprottr|O04904|PYRC_ARATH5.00E-144Dihydroorotase, mitochondrial (Precursor)
trEMBLtr|V4MI95|V4MI95_EUTSA7.00E-146Uncharacterized protein {ECO:0000313|EMBL:ESQ55052.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00014116517120505-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01465URA4, pyrC EC:3.5.2.3 Pyrimidine metabolism map00240


Gene Ontology

biological_process

GO:0019856  pyrimidine nucleobase biosynthetic process


molecular_function

GO:0004151  dihydroorotase activity

GO:0016787  hydrolase activity

GO:0016812  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000014s00002494.1PF01979.15Amidohydro_1102201.00E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.579
SRR1783600control6.733
SRR1783602moderate drought stress6.990
SRR1811619moderate drought stress6.924

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.766
DRR006520Root Summer glycyrrhizin high producing strain7.558
DRR006521Root Winter glycyrrhizin high producing strain7.250
DRR006522Root Winter glycyrrhizin high producing strain7.314
DRR006523Root Summer glycyrrhizin low producing strain8.794
DRR006524Root Summer glycyrrhizin low producing strain8.488
DRR006525Leaf Summer glycyrrhizin high producing strain5.529
DRR006526Leaf Summer glycyrrhizin high producing strain5.445

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.244
SRR2868004Drought Stress(Tissue:root)9.403
SRR2967015Control (Tissue:root)8.885

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.471
SRR9715740Leave7.307
SRR9715741Leave7.217
SRR9715739Root4.019
SRR9715742Root6.358
SRR9715743Root6.205

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.638
SRR8749028MeJA induced 9h12.281
SRR8749029MeJA induced 9h15.846
SRR8749030Uninduced7.710
SRR8749031Uninduced5.434
SRR8749032Uninduced4.701

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.533
SRR8400027Control-Root11.652

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved