Gene detail information of Glyur000014s00002508.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40116.17.00E-10Phosphoinositide-specific phospholipase C family protein
NRXP_007016094.14.74E-09Phosphatidylinositol-speciwc phospholipase C4 isoform 1 [Theobroma cacao]
Swissprottr|Q8GV43|PLCD6_ARATH7.00E-11Phosphoinositide phospholipase C 6
trEMBLtr|A0A061GWE1|A0A061GWE1_THECC2.00E-09Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00014172236175763+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05857PLCD EC:3.1.4.11 Inositol phosphate metabolism map00562
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
Thyroid hormone signaling pathwaymap04919
AGE-RAGE signaling pathway in diabetic complicationsmap04933


Gene Ontology

biological_process

GO:0006629  lipid metabolic process

GO:0007165  signal transduction

GO:0035556  intracellular signal transduction


molecular_function

GO:0004435  phosphatidylinositol phospholipase C activity

GO:0008081  phosphoric diester hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.295
SRR1783600control3.481
SRR1783602moderate drought stress5.618
SRR1811619moderate drought stress5.551

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.748
DRR006520Root Summer glycyrrhizin high producing strain5.968
DRR006521Root Winter glycyrrhizin high producing strain5.980
DRR006522Root Winter glycyrrhizin high producing strain6.235
DRR006523Root Summer glycyrrhizin low producing strain5.233
DRR006524Root Summer glycyrrhizin low producing strain6.886
DRR006525Leaf Summer glycyrrhizin high producing strain2.873
DRR006526Leaf Summer glycyrrhizin high producing strain2.764

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.890
SRR2868004Drought Stress(Tissue:root)7.758
SRR2967015Control (Tissue:root)6.785

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.356
SRR9715740Leave9.392
SRR9715741Leave6.441
SRR9715739Root1.897
SRR9715742Root3.641
SRR9715743Root2.696

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.136
SRR8749028MeJA induced 9h13.379
SRR8749029MeJA induced 9h13.448
SRR8749030Uninduced3.079
SRR8749031Uninduced1.897
SRR8749032Uninduced1.672

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.999
SRR8400027Control-Root21.223