Gene detail information of Glyur000014s00002508.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT2G40116.1 | 7.00E-10 | Phosphoinositide-specific phospholipase C family protein |
NR | XP_007016094.1 | 4.74E-09 | Phosphatidylinositol-speciwc phospholipase C4 isoform 1 [Theobroma cacao] |
Swissprot | tr|Q8GV43|PLCD6_ARATH | 7.00E-11 | Phosphoinositide phospholipase C 6 |
trEMBL | tr|A0A061GWE1|A0A061GWE1_THECC | 2.00E-09 | Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00014 | 172236 | 175763 | + |
Gene family
Gene family | subfamily |
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-- | -- |
KEGG pathway
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
-- | -- | -- | -- | -- |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 3.295 |
SRR1783600 | control | 3.481 |
SRR1783602 | moderate drought stress | 5.618 |
SRR1811619 | moderate drought stress | 5.551 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 6.748 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 5.968 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 5.980 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 6.235 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 5.233 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 6.886 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.873 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.764 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 7.890 |
SRR2868004 | Drought Stress(Tissue:root) | 7.758 |
SRR2967015 | Control (Tissue:root) | 6.785 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 3.356 |
SRR9715740 | Leave | 9.392 |
SRR9715741 | Leave | 6.441 |
SRR9715739 | Root | 1.897 |
SRR9715742 | Root | 3.641 |
SRR9715743 | Root | 2.696 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 23.136 |
SRR8749028 | MeJA induced 9h | 13.379 |
SRR8749029 | MeJA induced 9h | 13.448 |
SRR8749030 | Uninduced | 3.079 |
SRR8749031 | Uninduced | 1.897 |
SRR8749032 | Uninduced | 1.672 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 20.999 |
SRR8400027 | Control-Root | 21.223 |