Gene detail information of Glyur000014s00002519.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G20570.1 | 2.00E-62 | GBF's pro-rich region-interacting factor 1 |
| NR | XP_007132777.1 | 6.46E-180 | hypothetical protein PHAVU_011G124200g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SIV3|GLK1_ARATH | 6.00E-97 | Transcription activator GLK1 |
| trEMBL | tr|V7AKX5|V7AKX5_PHAVU | 2.00E-180 | Uncharacterized protein {ECO:0000313|EMBL:ESW04771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00014 | 236510 | 240834 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000014s00002519.1 | PF00249.26 | Myb_DNA-binding | 157 | 206 | 2.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.463 |
| SRR1783600 | control | 4.533 |
| SRR1783602 | moderate drought stress | 7.906 |
| SRR1811619 | moderate drought stress | 7.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.744 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.556 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.014 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.723 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.272 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 48.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.692 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.774 |
| SRR2967015 | Control (Tissue:root) | 3.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 59.522 |
| SRR9715740 | Leave | 71.891 |
| SRR9715741 | Leave | 72.809 |
| SRR9715739 | Root | 1.676 |
| SRR9715742 | Root | 5.192 |
| SRR9715743 | Root | 4.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.030 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.280 |
| SRR8400027 | Control-Root | 13.270 |