Gene detail information of Glyur000014s00002524.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G44180.10Homeodomain-like transcriptional regulator
NRXP_004505537.10PREDICTED: uncharacterized protein LOC101497214 isoform X1 [Cicer arietinum]
trEMBLtr|K7KY04|K7KY04_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G44290.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00014261093274486-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000014s00002524.1PF00046.24Homeobox17732.60E-16
Glyur000014s00002524.1PF02791.12DDT5275852.30E-24
Glyur000014s00002524.1PF05066.8HARE-HTH7047721.90E-11
Glyur000014s00002524.1PF15612.1WHIM19189630.00059
Glyur000014s00002524.1PF15613.1WHIM2109911352.80E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.600
SRR1783600control8.703
SRR1783602moderate drought stress10.325
SRR1811619moderate drought stress10.272

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.454
DRR006520Root Summer glycyrrhizin high producing strain9.386
DRR006521Root Winter glycyrrhizin high producing strain10.853
DRR006522Root Winter glycyrrhizin high producing strain10.505
DRR006523Root Summer glycyrrhizin low producing strain9.538
DRR006524Root Summer glycyrrhizin low producing strain9.379
DRR006525Leaf Summer glycyrrhizin high producing strain9.692
DRR006526Leaf Summer glycyrrhizin high producing strain9.538

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.849
SRR2868004Drought Stress(Tissue:root)14.289
SRR2967015Control (Tissue:root)16.142

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.869
SRR9715740Leave11.939
SRR9715741Leave11.764
SRR9715739Root0.831
SRR9715742Root11.113
SRR9715743Root9.427

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.632
SRR8749028MeJA induced 9h8.918
SRR8749029MeJA induced 9h8.300
SRR8749030Uninduced8.206
SRR8749031Uninduced11.737
SRR8749032Uninduced7.638

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.093
SRR8400027Control-Root16.651

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved