Gene detail information of Glyur000014s00002528.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28440.10HAESA-like 1
NRKEH39191.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004775215.12.00E-52RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9SGP2|HSL1_ARATH0Receptor-like protein kinase HSL1 (Precursor)
trEMBLtr|A0A072VC59|A0A072VC59_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH39191.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00014286798290157+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000014s00002528.1PF08263.7LRRNT_223639.10E-10
Glyur000014s00002528.1PF13855.1LRR_8851282.60E-06
Glyur000014s00002528.1PF00560.28LRR_11411630.014
Glyur000014s00002528.1PF13855.1LRR_82142731.50E-08
Glyur000014s00002528.1PF00560.28LRR_13583760.46
Glyur000014s00002528.1PF13855.1LRR_83834401.30E-08
Glyur000014s00002528.1PF13516.1LRR_64995210.024
Glyur000014s00002528.1PF00560.28LRR_15255450.53
Glyur000014s00002528.1PF00560.28LRR_15505710.4
Glyur000014s00002528.1PF00560.28LRR_15725920.1
Glyur000014s00002528.1PF00069.20Pkinase7138371.40E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.383
SRR1783600control13.427
SRR1783602moderate drought stress23.332
SRR1811619moderate drought stress23.298

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.845
DRR006520Root Summer glycyrrhizin high producing strain29.788
DRR006521Root Winter glycyrrhizin high producing strain8.457
DRR006522Root Winter glycyrrhizin high producing strain8.289
DRR006523Root Summer glycyrrhizin low producing strain35.927
DRR006524Root Summer glycyrrhizin low producing strain35.492
DRR006525Leaf Summer glycyrrhizin high producing strain22.221
DRR006526Leaf Summer glycyrrhizin high producing strain22.036

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.150
SRR2868004Drought Stress(Tissue:root)10.284
SRR2967015Control (Tissue:root)14.059

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.137
SRR9715740Leave26.159
SRR9715741Leave21.139
SRR9715739Root18.332
SRR9715742Root54.753
SRR9715743Root46.384

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.950
SRR8749028MeJA induced 9h1.261
SRR8749029MeJA induced 9h0.973
SRR8749030Uninduced0.840
SRR8749031Uninduced0.072
SRR8749032Uninduced0.104

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.785
SRR8400027Control-Root19.007

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved