Gene detail information of Glyur000014s00002557.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58100.13.00E-29plasmodesmata callose-binding protein 5
NRXP_004505519.11.47E-88PREDICTED: glucan endo-1,3-beta-glucosidase-like protein 1-like [Cicer arietinum]
Swissprottr|Q9M2K6|PDCB5_ARATH8.00E-49PLASMODESMATA CALLOSE-BINDING PROTEIN 5 (Precursor)
trEMBLtr|G7JV10|G7JV10_MEDTR2.00E-85Carbohydrate-binding X8 domain protein {ECO:0000313|EMBL:AES89750.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00014438785440148+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000014s00002557.1PF07983.8X8391109.50E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.801
SRR1783600control7.802
SRR1783602moderate drought stress5.075
SRR1811619moderate drought stress4.658

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.793
DRR006520Root Summer glycyrrhizin high producing strain8.191
DRR006521Root Winter glycyrrhizin high producing strain2.917
DRR006522Root Winter glycyrrhizin high producing strain2.652
DRR006523Root Summer glycyrrhizin low producing strain6.205
DRR006524Root Summer glycyrrhizin low producing strain6.539
DRR006525Leaf Summer glycyrrhizin high producing strain3.828
DRR006526Leaf Summer glycyrrhizin high producing strain3.553

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.449
SRR2868004Drought Stress(Tissue:root)6.614
SRR2967015Control (Tissue:root)6.890

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.109
SRR9715740Leave1.182
SRR9715741Leave2.222
SRR9715739Root9.620
SRR9715742Root6.878
SRR9715743Root6.139

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.100
SRR8749028MeJA induced 9h13.376
SRR8749029MeJA induced 9h11.345
SRR8749030Uninduced2.145
SRR8749031Uninduced0.750
SRR8749032Uninduced1.813

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.655
SRR8400027Control-Root17.511

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved