Gene detail

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Gene detail information of Glyur000015s00000753.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G33400.1	0	Tetratricopeptide repeat (TPR)-like superfamily protein
NR	AES72697.2	0	heat shock protein 70 (HSP70)-interacting protein, putative [Medicago truncatula]
COG	YP_007123279.1	1.00E-07	hypothetical protein Mic7113_4172 [Microcoleus sp. PCC 7113]
Swissprot	tr\|Q7XJS0\|ASHR1_ARATH	9.00E-09	Histone-lysine N-methyltransferase ASHR1
trEMBL	tr\|G7J9Q5\|G7J9Q5_MEDTR	0	Heat shock protein 70 (HSP70)-interacting protein, putative {ECO:0000313\|EMBL:AES72697.2}

Sequence

Transcript Sequence

>Glyur000015s00000753.1
GTTTTGTTTCAGCGGTACTGCTGGTACTAGTAGTAGTAGTGTAGNGGCAGTGTAGTAGAATCTGATGGAGACTCTGAAAGCTGCGATTCCAGAAGGCCTGAAGCGAGTGATAGGGGAGAGCACCGTGGATGATCTTCGCGGAACATGTTCTTCTCTTCACCGCTTCTTTCTCAACTTCGAGCCATTTCACCAGGTGGTGGCTCAATTGGCGNACCCAAGCCATGCTCTGTGCGGCAAGAGCAAGGATGCTGCGTTGCAATCCAAGCAGCTTGGCAATCACTGCTTCTCCAACGCTGATTATGCGAAGGCTTTGGATTATTATACTCAGGCATTACGCAAGGCTCCTTTTGAGGCTGGTGACACGGAAAATAATCATATTGCAACATTGTATATCAATCGAGCTACTGTATTGCATAAAATGAGTCTTTTAATAGAATGCTTGCGAGACTGCAATCGAGCTCTTCAGATATGTCCAAGCTACGCAAAGTTACACACCATTATAGAAGGGGATGAAATTCTTGCATTTGCATGGTATAGGAGAGGAAAGGTGAATGCTTCATTGAGAAATTATAAAGATGCGATCTGTGACCTAAATATGGCTAAGAGTATGGAATCCTCAACTGGGGGGAAGAGACAAATAGAAAGTGAGCTGAAAATTATTTTCGATCAATGCAAGAGCACAAGTACAGTAATACAACCGCAACATAAGAACAGCTTGAATACAGTGGGTGAGATGCCCCAAATAAAGCTACAGTGTGTCTCCATGCCTGACAAAGGAAGAGGCATGGTGTCGTCATGTGATATTTCACCAGGTTCTTTGGTTCATGCAGAAGAACCTTATGCTACAATAATATTAAAGCAATGCCGGGAAACTCATTGCCATTATTGCTTGAATGACCTACCTGCTGATAGTGTTCCTTGTATATCATGTTCGATACCAATGTACTGCTCCCACCAATGCCGGATACAGGCAGGCGGGCAAATGTTCAGGATTTACCCAGAAGATAATAGCACTCTTAAAAACTTACCCAGTGATCTTGGAGAATATGCTGCTAAAATTATTCAATATAATGATTATGAACAAGAGATTGAGGATGTTACTGAACATAAACATGAATGTGAAGGTGTAAATTGGCCTGCTGTACTACCGTCTGAGATAGTTTTGGCTGGCCGAATACTAGCAAGATATTTTTCAAAGAGCTCATCTGAAGATATTACAGATTTTGTGGAAAAACTGGAGCTTTTTCATTGTTACGAACACATACCATTCGAAAGCAAATTGGATTCACATATATACGCCACTGTATTGTTATATTGCCTTAAACACACTTACGGAACTATGTTTTCCATTGATGGAGTCTCCATATCGCAGGTTATCATAATTATTTCTCAAATTAAAGTGAATTGTATAACTGTTATTCGTTTAAAATCAATAGATGCTCATGGACTATCAGATCAGTCTGGAGAATTTCCATTTCAATCCAGCATACATTTAACTAGTAATGTGGAACAGGTCAGAGTGGGTAAAGCTATTTATAAAGCTGGAAGTTTATTCAACCATTCTTGCCAACCAAATGTTCATGCATATTTTCTTTCACGCACTCTCTATTTACGAACCACAAAAGTTGTAGCAGCAGGGTGTCAGCTGGAATTGTCTTATGGTCCACAGGTTGGGTTGTGGGATTGTAAAGATCGCCATAATTTTCTCAAAGATGAATACGCATTTCATTGTCAATGTACTGGTTGTTCAGAAGTCAATCTATCTGACATTGTCCTCAATGCTTTTCATTGTGTCAATCCAAGTTGTTCTGGTGCAGTGTTGGAAAGTAGAGTACTTGACTATGAAAAGCAGAAAATCAAACACTTCCCTATTGCTGACAAAGTTGACAAGAATGATGACATATATGAAGTATGTCTTCATGCNTCCAACCAAAATGATTCCTCTATTCCTATTCAACCTGGATACTGTTTGAAATGTGGTTCTTACTGTGATTTGGAGGCTTCACGTGCCACAGTTGACAAAGCCTTAATATGCATAAAAAGGTTGCAGGATGCAATACTGTCAAGAGAAATTTCAAATGCTTATATTTCAGATGCTTTGAGATCTCTTCATTTGCTGAGATCAAATTTGCATGCATACAACAAGCTTATCGCAGAGGCAGAAGACAACCTTGCCCAGGCTTTTTGTTCAGTCGGAGAATTACAATTAGCTTTGGATCATTGTAAAGCATCTATTCAGATTCTGGAGAATCTATATGATCCTGATGATATTGTTATTGCTTACGAACTTGTGAAGCTTTCTTCCATCCAACTTTCCTTGGGTGGTGATACTGCTGTGGACAGCATTAGTCGAATAGGTGGTATCTTCTCACATTATTATGGACATCATGCAGACTTGGTCTTTCCCTATTCTCAATACCTTAGGAGAGAAATTGAGAATTTTCAGTGAGGGCTCTCCAATCGAATGCGTTTCCAGAAAAGTGAGCTATAGAATGATAGGAAAAAGCGTCAAAGCTTAAATGACAAGTCATTTGATATGAAAGATCTACAATAGTCAACGACCTCAAGAAAGGTTACTCAAAGCTCATCCAAGCAGTGTGGCAGTCAATACTTCTTGTGCGTAGATAAAGATGCAGGCTTTGTTCACTCCTTTATGATATTCTCTGTACTATAAGCTAGCCTCCGAAGCGGATCATTGTTGATTGTGCTTTTGTATCAGGCGGGAACAATGCGGAGACTGTTGGACATGGTTTCTGGCTTTCTCATATGCTCTGGACATATGTGACGCTTCTGGGCTATCACAGGCTGGATAAAGGATTCGGCGAAGGTGAACAGCGCTCTAGAACACGAATTGAGGACTTCGAAGTGTATTCTCATCTATAGACTATAGTCCTCGAATCAGGATTTATGGTGCCCAAATTATGGGGGATTGTGTTATGTANGTGTAATGGGATTTGACGTGTCCACGCCATCCTTTTTTGCTTTACTGGGTGTGGGGATTCAAACATGGGANTCGACCTTCTGGAGATCAACACTCCTGCGTTTATGGGTGATGTAGGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00015	61875	70955	-

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000015s00000753.1	PF13414.1	TPR_11	63	137	6.00E-12
Glyur000015s00000753.1	PF00856.23	SET	479	533	3.50E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.703
SRR1783600	control	3.716
SRR1783602	moderate drought stress	6.319
SRR1811619	moderate drought stress	6.355

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.387
DRR006520	Root Summer glycyrrhizin high producing strain	4.407
DRR006521	Root Winter glycyrrhizin high producing strain	10.472
DRR006522	Root Winter glycyrrhizin high producing strain	10.441
DRR006523	Root Summer glycyrrhizin low producing strain	6.266
DRR006524	Root Summer glycyrrhizin low producing strain	6.498
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.012
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.026

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	9.377
SRR2868004	Drought Stress(Tissue:root)	9.992
SRR2967015	Control (Tissue:root)	10.623

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	2.957
SRR9715740	Leave	4.125
SRR9715741	Leave	3.512
SRR9715739	Root	0.652
SRR9715742	Root	4.433
SRR9715743	Root	2.921

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.375
SRR8749028	MeJA induced 9h	9.563
SRR8749029	MeJA induced 9h	4.816
SRR8749030	Uninduced	1.597
SRR8749031	Uninduced	0.972
SRR8749032	Uninduced	1.138

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	9.722
SRR8400027	Control-Root	9.612