Gene detail information of Glyur000015s00000753.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G33400.10Tetratricopeptide repeat (TPR)-like superfamily protein
NRAES72697.20heat shock protein 70 (HSP70)-interacting protein, putative [Medicago truncatula]
COGYP_007123279.11.00E-07hypothetical protein Mic7113_4172 [Microcoleus sp. PCC 7113]
Swissprottr|Q7XJS0|ASHR1_ARATH9.00E-09Histone-lysine N-methyltransferase ASHR1
trEMBLtr|G7J9Q5|G7J9Q5_MEDTR0Heat shock protein 70 (HSP70)-interacting protein, putative {ECO:0000313|EMBL:AES72697.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000156187570955-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000015s00000753.2PF13414.1TPR_11631377.10E-12
Glyur000015s00000753.2PF00515.23TPR_11401600.056
Glyur000015s00000753.2PF00856.23SET4665203.40E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.703
SRR1783600control3.716
SRR1783602moderate drought stress6.319
SRR1811619moderate drought stress6.355

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.387
DRR006520Root Summer glycyrrhizin high producing strain4.407
DRR006521Root Winter glycyrrhizin high producing strain10.472
DRR006522Root Winter glycyrrhizin high producing strain10.441
DRR006523Root Summer glycyrrhizin low producing strain6.266
DRR006524Root Summer glycyrrhizin low producing strain6.498
DRR006525Leaf Summer glycyrrhizin high producing strain2.012
DRR006526Leaf Summer glycyrrhizin high producing strain2.026

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.377
SRR2868004Drought Stress(Tissue:root)9.992
SRR2967015Control (Tissue:root)10.623

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.957
SRR9715740Leave4.125
SRR9715741Leave3.512
SRR9715739Root0.652
SRR9715742Root4.433
SRR9715743Root2.921

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.375
SRR8749028MeJA induced 9h9.563
SRR8749029MeJA induced 9h4.816
SRR8749030Uninduced1.597
SRR8749031Uninduced0.972
SRR8749032Uninduced1.138

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.722
SRR8400027Control-Root9.612

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved