Gene detail information of Glyur000015s00000787.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G24470.1 | 3.00E-25 | pseudo-response regulator 5 |
| NR | XP_003528000.1 | 0 | PREDICTED: two-component response regulator-like PRR95-like [Glycine max] |
| Swissprot | tr|Q689G6|PRR95_ORYSJ | 2.00E-47 | Two-component response regulator-like PRR95 |
| trEMBL | tr|K7KUW7|K7KUW7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G14150.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 240036 | 244156 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000787.1 | PF06203.9 | CCT | 555 | 597 | 2.10E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.578 |
| SRR1783600 | control | 0.642 |
| SRR1783602 | moderate drought stress | 0.695 |
| SRR1811619 | moderate drought stress | 0.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.366 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.415 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.997 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.740 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.499 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.273 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.328 |
| SRR2967015 | Control (Tissue:root) | 1.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.823 |
| SRR9715740 | Leave | 2.222 |
| SRR9715741 | Leave | 1.799 |
| SRR9715739 | Root | 0.011 |
| SRR9715742 | Root | 0.375 |
| SRR9715743 | Root | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.573 |
| SRR8749028 | MeJA induced 9h | 4.647 |
| SRR8749029 | MeJA induced 9h | 3.526 |
| SRR8749030 | Uninduced | 2.558 |
| SRR8749031 | Uninduced | 5.391 |
| SRR8749032 | Uninduced | 1.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.510 |
| SRR8400027 | Control-Root | 0.460 |