Gene detail information of Glyur000015s00000790.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54180.1 | 2.00E-132 | plastid transcriptionally active 15 |
| NR | XP_004502758.1 | 0 | PREDICTED: uncharacterized protein LOC101513939 [Cicer arietinum] |
| trEMBL | tr|G7J8Z8|G7J8Z8_MEDTR | 0 | Plastid transcriptionally active 15 protein {ECO:0000313|EMBL:AES72631.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 256258 | 258150 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000790.1 | PF02536.9 | mTERF | 127 | 369 | 3.20E-13 |
| Glyur000015s00000790.1 | PF02536.9 | mTERF | 314 | 503 | 1.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.088 |
| SRR1783600 | control | 5.052 |
| SRR1783602 | moderate drought stress | 3.945 |
| SRR1811619 | moderate drought stress | 4.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.451 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.243 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.192 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.022 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.051 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.906 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.535 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.779 |
| SRR2967015 | Control (Tissue:root) | 2.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.496 |
| SRR9715740 | Leave | 1.044 |
| SRR9715741 | Leave | 0.771 |
| SRR9715739 | Root | 2.601 |
| SRR9715742 | Root | 2.498 |
| SRR9715743 | Root | 2.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.161 |
| SRR8749028 | MeJA induced 9h | 4.507 |
| SRR8749029 | MeJA induced 9h | 3.611 |
| SRR8749030 | Uninduced | 1.019 |
| SRR8749031 | Uninduced | 0.525 |
| SRR8749032 | Uninduced | 0.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.599 |
| SRR8400027 | Control-Root | 4.175 |