Gene detail

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Gene detail information of Glyur000015s00000811.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G47570.1	1.00E-154	Leucine-rich repeat protein kinase family protein
NR	XP_004502737.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum]
COG	YP_004775215.1	1.00E-56	RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprot	tr\|C0LGP4\|Y3475_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBL	tr\|G7J897\|G7J897_MEDTR	0	LRR receptor-like kinase family protein {ECO:0000313\|EMBL:AES72595.1}

Sequence

Transcript Sequence

>Glyur000015s00000811.1
ATGATGATCCACATAACTCGACCCATTTTGCTCCTTTGTTTCCTACTTCATCATTTTGATGGCATCATTTGCAGCAATGACACTGCAGAGAGAGATGCCCTTCTTTCCTTCAGATACCAAGTGACTGACCCAAATAATGCTCTGTCCAATTGGTCAACAGATTCCAATCACTGCACCTGGTACGGTGTCAATTGCTCCAAAGTTGGAAACAGTAACAAAGTTCAATCTCTCACACTACCNGGACTTGGCCTCTCTGGTAAACTACCCTCTCACCTCTCCAACCTCACTCANCTACGTTCACTTGACCTTTCCAATAACAGATTTCATGGCCAAATTCCCCTTGAGTTTGCCCATCTCTCACTTCTTAATGTCATTAACTTAGCTTACAACAATCTCACTGGTACACTTCCTGAACAATTAGGCCAACTGCATCATCTACAAAGGTTAGACTTTTCTGTCAATAATCTCACAGGCAAAATCCCTCCAACAATTGGCAATCTCTTGTCTCTCAATGCTCTTGCCTTGGCAAGAAACCAGTTTGTGGNTGAGATTCCAAGTGAATTGGGTAACCTCCACAATCTTTCCCAACTTCAACTCTCAGAGAACTATTTCACTGGCGAGTTTCCCACTTCTCTCTTCAACATCTCTTCCTTGGTCTTCTTATCCGTCACAATGAACAATCTCTCAGGCGAGTTGCCACAAAATTTGGGCAATGCCCTTCCAAATTTAACGACACTCGCTCTGGCAACCAATAGTTTTGGTGGGGTGATTCCTGATTCCATATCCAATGCCTCACATCTCCAAATGATTGATCTTGCTAACAATAAATTTCATGGGTCTATACCTTTACTCAACAACTTGAAAAATCTTACCCACTTGACTCTNGGTAACAATTATCTCTCTTCCACCACGTCATTGAATTTCCAGTTCTTTAATTCCCTTAGGAACTCCACTCAGTTGCAAATTCTCATGATCAATGATAACTACTTGTCTGGGCAACTTCCGAGTTCTGTTGCCAACCTGTCTAGCAATCTCCAACAGTTCTGTGTTGCCAATAATCAGCTAACCGGAAGCATTCCTCAGGGGATGAAGAGATTTCAAAATCTCATATCCCTGTCTTTTGAAAATAACAGTTTCACTGGACAGTTACCATCAGAACTAGGAGCTCTCAGTAAGTTGGAGCAGCTTTTGATATACAGAAATAGATTGTCTGGAGAAATTCCAGACATTTTTGGCAATTTTACAAACCTGTATAGACTTGCAATGGGAAACAATCAATTCTCAGGTAGAATTCAAAAAAGTATTGGACAATGCAAGAGATTGACTCTTCTTGGCCTGGAAATGAATAAGCTTGGTGGGACCATACCAAAGGAGATTTTTCAACTCTCGAGCTTGACAACCTTGTACTTACAAAGAAACTCTCTACATGGTTCGCTTCCTTCTGAGGTCAACAACATGGAGCAACTTGAGACCATGCTTGTTTCTGGCAACCAGCTGTCAGGGTACATTCCTAATTTCGACACCTTTTCTAGCTTGAAGAGTCTTATGATGGCAAGAAACAAATTTAGTGGCTCAATCCCAAATAGTTTAGGGGATTTAGTATCCCTTGTGACTTTGGATCTGTCCTCAAACAATCTCACTGGCCCAATTCCTAAAAGTTTAGAAAAGCCCAAGGAAATGGTGAGCTTGAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCTATGAAAGGTGTTTTCACAAACCTTAGCCAGGTTGACCTCCGNGGTAACAACAAACTATGTGGCCTCAACAGTGAAATGGTGCAGAAATTAGGAGTGGTCCTGTGTGTGAATGCAGATAAAAAGAAGAGAAGCATTTTGCTCCCTATCATACTAGCAGTTACAGGTGCTACTGCTTTGTTCATTTCAATACTCTATCTACTATGGGTTCTAATGTCCAGAAAGAAGAAACGCAGGCAGGAGAAAACCAGTTTGTCATCTTACCCTCTTAGGGGTTTACCTCAAAATATATCCTATGGTGATATTAGGCTTGCTACAAACAGTTTTGCAGCTGAAAACTTGATTGGAAAAGGAGGCTTTGGCTCTGTTTATAAGGGTGTGTTCAGCATCAGCACTGGTGAAAGTGAACCCACCACACTTGCTGTCAAAGTTCTGGACCTGCAACAAAGCAAAGCCTCTCAAAGTTTCAATTCAGAATGTGAAGCTTTGAAAAACATTAGGCATAGGAACCTGGTGAAGGTGGTCACTTCTTGCTCCAGCGTTGACCATAAGGGAGATGAATTTAAGGCCCTTGTTATGCAATTCATGCCCAATGGTAATTTGGAGATGAGTTTATACCCGAATGATGATGAGTACTCGGGATCTTCTCTGACACTGTTGCAAAGGCTAAACATTGCCATTGATGTTGCTTCTGCCATGGACTACTTGCACCATGACTGTGACCCACCATTAGTTCATCGTGATCTGAAACCTGCCAATGTCCTACTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGATTGGCGAGGTTTGTTTCTCAAAATCCATCAGAGGAGAAACAAAGTAGCACTCTAAAACTGAAGGGATCAATCGGCTATATTGCCCCAGAGATGTTCATAGCCAGAAAACCAACTGATGAAATGTTCAGAGAAGGATTAAGCCTGAACAAATCTGATCCAGCCATGGATAAGAATCAAGTACTGAAGGTTGCTGATCAAAGGCTCATTAACCATTCTGAATATTCTTCGACACAAGACTTCAGCACTAGTGCTTCTCATGGCGGTGGGTCCGAAGACACCAGCAACGGTGAAGGTTACACACATTGGACGCACAAGGCGGAGGAGTGCTTAGTTGCTGTTATAAGAGTTGGCCTGTGTTGCACAGCTCATCATCCCAAAGATCGATGGACCATGAGAGAGGCCTTAACAAAACTTCAAGGAATTAGGCTCTCTATGCTGGCCTNGTGA

Protein Sequence

>Glyur000015s00000811.1
MMIHITRPILLLCFLLHHFDGIICSNDTAERDALLSFRYQVTDPNNALSNWSTDSNHCTWYGVNCSKVGNSNKVQSLTLPGLGLSGKLPSHLSNLTXLRSLDLSNNRFHGQIPLEFAHLSLLNVINLAYNNLTGTLPEQLGQLHHLQRLDFSVNNLTGKIPPTIGNLLSLNALALARNQFVXEIPSELGNLHNLSQLQLSENYFTGEFPTSLFNISSLVFLSVTMNNLSGELPQNLGNALPNLTTLALATNSFGGVIPDSISNASHLQMIDLANNKFHGSIPLLNNLKNLTHLTLGNNYLSSTTSLNFQFFNSLRNSTQLQILMINDNYLSGQLPSSVANLSSNLQQFCVANNQLTGSIPQGMKRFQNLISLSFENNSFTGQLPSELGALSKLEQLLIYRNRLSGEIPDIFGNFTNLYRLAMGNNQFSGRIQKSIGQCKRLTLLGLEMNKLGGTIPKEIFQLSSLTTLYLQRNSLHGSLPSEVNNMEQLETMLVSGNQLSGYIPNFDTFSSLKSLMMARNKFSGSIPNSLGDLVSLVTLDLSSNNLTGPIPKSLEKPKEMVSLNLSFNHLEGEVPMKGVFTNLSQVDLRGNNKLCGLNSEMVQKLGVVLCVNADKKKRSILLPIILAVTGATALFISILYLLWVLMSRKKKRRQEKTSLSSYPLRGLPQNISYGDIRLATNSFAAENLIGKGGFGSVYKGVFSISTGESEPTTLAVKVLDLQQSKASQSFNSECEALKNIRHRNLVKVVTSCSSVDHKGDEFKALVMQFMPNGNLEMSLYPNDDEYSGSSLTLLQRLNIAIDVASAMDYLHHDCDPPLVHRDLKPANVLLDEDMVAHVADFGLARFVSQNPSEEKQSSTLKLKGSIGYIAPEMFIARKPTDEMFREGLSLNKSDPAMDKNQVLKVADQRLINHSEYSSTQDFSTSASHGGGSEDTSNGEGYTHWTHKAEECLVAVIRVGLCCTAHHPKDRWTMREALTKLQGIRLSMLAX

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00015	355120	358411	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000015s00000811.1	PF08263.7	LRRNT_2	29	66	1.30E-11
Glyur000015s00000811.1	PF00560.28	LRR_1	98	119	0.045
Glyur000015s00000811.1	PF00560.28	LRR_1	145	167	0.29
Glyur000015s00000811.1	PF13855.1	LRR_8	241	300	8.90E-07
Glyur000015s00000811.1	PF13855.1	LRR_8	510	570	1.90E-06
Glyur000015s00000811.1	PF07714.12	Pkinase_Tyr	686	878	1.90E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.147
SRR1783600	control	0.124
SRR1783602	moderate drought stress	0.064
SRR1811619	moderate drought stress	0.064

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.073
DRR006520	Root Summer glycyrrhizin high producing strain	0.072
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.037
DRR006524	Root Summer glycyrrhizin low producing strain	0.037
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.014
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.047

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.186
SRR2868004	Drought Stress(Tissue:root)	0.216
SRR2967015	Control (Tissue:root)	0.416

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	4.169
SRR9715740	Leave	0.941
SRR9715741	Leave	2.808
SRR9715739	Root	0.437
SRR9715742	Root	0.555
SRR9715743	Root	0.925

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.073
SRR8749028	MeJA induced 9h	0.068
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.409
SRR8749031	Uninduced	0.013
SRR8749032	Uninduced	0.054

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.192
SRR8400027	Control-Root	0.410