Gene detail information of Glyur000015s00000812.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53660.1 | 1.00E-27 | growth-regulating factor 7 |
| NR | XP_007136460.1 | 5.19E-177 | hypothetical protein PHAVU_009G047000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FJB8|GRF7_ARATH | 8.00E-37 | Growth-regulating factor 7 |
| trEMBL | tr|V7ASA3|V7ASA3_PHAVU | 2.00E-177 | Uncharacterized protein {ECO:0000313|EMBL:ESW08454.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00015 | 359942 | 362774 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000015s00000812.1 | PF08880.6 | QLQ | 150 | 180 | 1.00E-15 |
| Glyur000015s00000812.1 | PF08879.5 | WRC | 206 | 249 | 3.60E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.457 |
| SRR1783600 | control | 2.331 |
| SRR1783602 | moderate drought stress | 1.711 |
| SRR1811619 | moderate drought stress | 1.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.850 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.887 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.014 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.073 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.438 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.571 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.064 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.321 |
| SRR2967015 | Control (Tissue:root) | 1.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.184 |
| SRR9715740 | Leave | 0.069 |
| SRR9715741 | Leave | 0.085 |
| SRR9715739 | Root | 1.173 |
| SRR9715742 | Root | 1.909 |
| SRR9715743 | Root | 1.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.001 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.943 |
| SRR8400027 | Control-Root | 2.941 |