Gene detail information of Glyur000015s00000819.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24430.10Calcium-dependent protein kinase (CDPK) family protein
NRXP_004502721.10PREDICTED: CDPK-related kinase 4-like [Cicer arietinum]
COGYP_007468874.11.00E-26serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9FIM9|CAMK4_ARATH0CDPK-related kinase 4
trEMBLtr|I1KAY9|I1KAY9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13920.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00015404388411304+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000015s00000819.1PF00069.20Pkinase1443922.30E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.241
SRR1783600control10.162
SRR1783602moderate drought stress11.951
SRR1811619moderate drought stress11.780

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.366
DRR006520Root Summer glycyrrhizin high producing strain10.350
DRR006521Root Winter glycyrrhizin high producing strain10.787
DRR006522Root Winter glycyrrhizin high producing strain10.523
DRR006523Root Summer glycyrrhizin low producing strain15.311
DRR006524Root Summer glycyrrhizin low producing strain15.212
DRR006525Leaf Summer glycyrrhizin high producing strain7.728
DRR006526Leaf Summer glycyrrhizin high producing strain7.716

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.628
SRR2868004Drought Stress(Tissue:root)25.607
SRR2967015Control (Tissue:root)20.885

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.817
SRR9715740Leave15.253
SRR9715741Leave22.157
SRR9715739Root6.335
SRR9715742Root13.395
SRR9715743Root12.299

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.835
SRR8749028MeJA induced 9h38.722
SRR8749029MeJA induced 9h28.415
SRR8749030Uninduced42.865
SRR8749031Uninduced36.226
SRR8749032Uninduced27.775

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.434
SRR8400027Control-Root17.604

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved