Gene detail information of Glyur000015s00000828.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G12250.22.00E-116TGACG motif-binding factor 6
NRXP_007133721.10hypothetical protein PHAVU_011G203400g [Phaseolus vulgaris]
Swissprottr|Q41558|HBP1C_WHEAT0Transcription factor HBP-1b(c1) (Fragment)
trEMBLtr|Q93XA1|Q93XA1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW05715.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00015447031452948-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000015s00000828.2PF00170.16bZIP_11521932.70E-07
Glyur000015s00000828.2PF14144.1DOG12343125.20E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.079
SRR1783600control14.153
SRR1783602moderate drought stress14.661
SRR1811619moderate drought stress14.555

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.867
DRR006520Root Summer glycyrrhizin high producing strain18.963
DRR006521Root Winter glycyrrhizin high producing strain28.965
DRR006522Root Winter glycyrrhizin high producing strain27.674
DRR006523Root Summer glycyrrhizin low producing strain27.726
DRR006524Root Summer glycyrrhizin low producing strain27.289
DRR006525Leaf Summer glycyrrhizin high producing strain14.701
DRR006526Leaf Summer glycyrrhizin high producing strain14.159

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.509
SRR2868004Drought Stress(Tissue:root)46.990
SRR2967015Control (Tissue:root)54.684

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.610
SRR9715740Leave35.224
SRR9715741Leave36.016
SRR9715739Root10.491
SRR9715742Root22.786
SRR9715743Root21.438

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.918
SRR8749028MeJA induced 9h38.321
SRR8749029MeJA induced 9h13.174
SRR8749030Uninduced35.136
SRR8749031Uninduced14.787
SRR8749032Uninduced15.937

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.285
SRR8400027Control-Root38.941

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved