Gene detail information of Glyur000015s00000831.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13530.10protein kinases;ubiquitin-protein ligases
NRXP_003538267.10PREDICTED: E3 ubiquitin-protein ligase KEG-like [Glycine max]
COGYP_001957821.12.00E-25hypothetical protein Aasi_0703 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FY48|KEG_ARATH0E3 ubiquitin-protein ligase KEG
trEMBLtr|I1LLG6|I1LLG6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G25680.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00015464409476276+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.2.2
Ubiquitin FamilyRING


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0008270  zinc ion binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000015s00000831.1PF14634.1zf-RING_56521.40E-07
Glyur000015s00000831.1PF00069.20Pkinase1424247.90E-33
Glyur000015s00000831.1PF00023.25Ank5115351.80E-05
Glyur000015s00000831.1PF12796.2Ank_25506372.40E-12
Glyur000015s00000831.1PF12796.2Ank_26537575.30E-12
Glyur000015s00000831.1PF12796.2Ank_27598291.70E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.494
SRR1783600control20.574
SRR1783602moderate drought stress22.344
SRR1811619moderate drought stress22.169

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.198
DRR006520Root Summer glycyrrhizin high producing strain19.167
DRR006521Root Winter glycyrrhizin high producing strain29.780
DRR006522Root Winter glycyrrhizin high producing strain29.154
DRR006523Root Summer glycyrrhizin low producing strain21.730
DRR006524Root Summer glycyrrhizin low producing strain21.771
DRR006525Leaf Summer glycyrrhizin high producing strain10.336
DRR006526Leaf Summer glycyrrhizin high producing strain10.127

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.514
SRR2868004Drought Stress(Tissue:root)44.832
SRR2967015Control (Tissue:root)47.060

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.801
SRR9715740Leave20.080
SRR9715741Leave22.342
SRR9715739Root11.103
SRR9715742Root44.142
SRR9715743Root39.165

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.917
SRR8749028MeJA induced 9h38.129
SRR8749029MeJA induced 9h19.887
SRR8749030Uninduced27.008
SRR8749031Uninduced18.933
SRR8749032Uninduced15.238

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.846
SRR8400027Control-Root43.445

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved