Gene detail information of Glyur000016s00003023.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G63450.14.00E-118cytochrome P450, family 94, subfamily B, polypeptide 1
NRAAL54885.10cytochrome P450-dependent fatty acid hydroxylase [Vicia sativa]
COGYP_003534112.11.00E-36cytochrome P450 [Haloferax volcanii DS2]
Swissprottr|P98188|C94A2_VICSA0Cytochrome P450 94A2
trEMBLtr|Q8W2N3|Q8W2N3_VICSA0Cytochrome P450-dependent fatty acid hydroxylase {ECO:0000313|EMBL:AAL54885.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00016167424168977-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP94B1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000016s00003023.1PF00067.17p450464889.00E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.184
SRR1783600control6.067
SRR1783602moderate drought stress15.649
SRR1811619moderate drought stress15.833

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.069
DRR006521Root Winter glycyrrhizin high producing strain0.831
DRR006522Root Winter glycyrrhizin high producing strain0.932
DRR006523Root Summer glycyrrhizin low producing strain1.136
DRR006524Root Summer glycyrrhizin low producing strain1.066
DRR006525Leaf Summer glycyrrhizin high producing strain0.955
DRR006526Leaf Summer glycyrrhizin high producing strain1.014

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.222
SRR2868004Drought Stress(Tissue:root)27.019
SRR2967015Control (Tissue:root)20.709

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.040
SRR9715740Leave3.823
SRR9715741Leave11.619
SRR9715739Root69.473
SRR9715742Root8.618
SRR9715743Root22.323

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.726
SRR8749028MeJA induced 9h61.266
SRR8749029MeJA induced 9h46.895
SRR8749030Uninduced37.532
SRR8749031Uninduced40.660
SRR8749032Uninduced86.365

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.675
SRR8400027Control-Root9.190

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved