Gene detail information of Glyur000016s00003082.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G63340.10Protein phosphatase 2C family protein
NRXP_006575055.10PREDICTED: uncharacterized protein LOC100781476 isoform X1 [Glycine max]
COGYP_006527485.14.00E-06serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
Swissprottr|Q8RXY0|Y3333_ARATH2.00E-175Probable inactive protein kinase At3g63330
trEMBLtr|K7K8D0|K7K8D0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G16295.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00016495138508735+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000016s00003082.1PF00481.16PP2C1914341.70E-36
Glyur000016s00003082.1PF00069.20Pkinase82610801.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.162
SRR1783600control7.095
SRR1783602moderate drought stress10.912
SRR1811619moderate drought stress10.564

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.017
DRR006520Root Summer glycyrrhizin high producing strain8.947
DRR006521Root Winter glycyrrhizin high producing strain14.007
DRR006522Root Winter glycyrrhizin high producing strain13.729
DRR006523Root Summer glycyrrhizin low producing strain8.631
DRR006524Root Summer glycyrrhizin low producing strain8.470
DRR006525Leaf Summer glycyrrhizin high producing strain6.706
DRR006526Leaf Summer glycyrrhizin high producing strain6.621

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.534
SRR2868004Drought Stress(Tissue:root)13.316
SRR2967015Control (Tissue:root)14.741

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.429
SRR9715740Leave8.484
SRR9715741Leave9.380
SRR9715739Root0.846
SRR9715742Root5.811
SRR9715743Root4.446

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.463
SRR8749028MeJA induced 9h9.027
SRR8749029MeJA induced 9h4.932
SRR8749030Uninduced8.469
SRR8749031Uninduced4.839
SRR8749032Uninduced3.673

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.262
SRR8400027Control-Root11.751

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved