Gene detail information of Glyur000016s00003090.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34650.1 | 1.00E-28 | Protein kinase superfamily protein |
| NR | XP_007159618.1 | 1.98E-45 | hypothetical protein PHAVU_002G252500g [Phaseolus vulgaris] |
| Swissprot | tr|O64682|PID_ARATH | 4.00E-40 | Protein kinase PINOID |
| trEMBL | tr|V7CN20|V7CN20_PHAVU | 7.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ESW31612.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00016 | 538931 | 539455 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.2.6 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000016s00003090.1 | PF00069.20 | Pkinase | 56 | 135 | 4.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.368 |
| SRR1783600 | control | 0.070 |
| SRR1783602 | moderate drought stress | 0.376 |
| SRR1811619 | moderate drought stress | 0.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.415 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.316 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.047 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.745 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.406 |
| SRR2967015 | Control (Tissue:root) | 0.785 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.422 |
| SRR9715740 | Leave | 0.785 |
| SRR9715741 | Leave | 0.579 |
| SRR9715739 | Root | 0.080 |
| SRR9715742 | Root | 0.438 |
| SRR9715743 | Root | 0.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.308 |
| SRR8749028 | MeJA induced 9h | 0.218 |
| SRR8749029 | MeJA induced 9h | 0.749 |
| SRR8749030 | Uninduced | 1.614 |
| SRR8749031 | Uninduced | 0.321 |
| SRR8749032 | Uninduced | 1.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.674 |
| SRR8400027 | Control-Root | 0.695 |