Gene detail information of Glyur000016s00003092.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04810.27.00E-112NIMA-related kinase 2
NRXP_003536912.19.59E-147PREDICTED: serine/threonine-protein kinase Nek2-like isoform X1 [Glycine max]
COGYP_006527485.14.00E-29serine/threonine protein kinase with PASTA sensor(s) [Melioribacter roseus P3M-2]
Swissprottr|Q2QMH1|NEK2_ORYSJ1.00E-136Serine/threonine-protein kinase Nek2
trEMBLtr|I1L868|I1L868_SOYBN4.00E-147Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G03470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00016552303565996-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000016s00003092.1PF00069.20Pkinase272303.50E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.644
SRR1783600control1.841
SRR1783602moderate drought stress2.406
SRR1811619moderate drought stress2.318

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.698
DRR006520Root Summer glycyrrhizin high producing strain1.813
DRR006521Root Winter glycyrrhizin high producing strain3.682
DRR006522Root Winter glycyrrhizin high producing strain3.553
DRR006523Root Summer glycyrrhizin low producing strain2.810
DRR006524Root Summer glycyrrhizin low producing strain2.861
DRR006525Leaf Summer glycyrrhizin high producing strain3.087
DRR006526Leaf Summer glycyrrhizin high producing strain3.641

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.211
SRR2868004Drought Stress(Tissue:root)6.274
SRR2967015Control (Tissue:root)7.212

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.526
SRR9715740Leave7.066
SRR9715741Leave5.619
SRR9715739Root1.204
SRR9715742Root2.451
SRR9715743Root2.108

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.473
SRR8749028MeJA induced 9h18.240
SRR8749029MeJA induced 9h15.319
SRR8749030Uninduced10.013
SRR8749031Uninduced5.588
SRR8749032Uninduced4.528

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.082
SRR8400027Control-Root6.375

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved